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5KD1

Sperm whale myoglobin H64A with nitrosoamphetamine

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0005737cellular_componentcytoplasm
A0015671biological_processoxygen transport
A0016491molecular_functionoxidoreductase activity
A0016528cellular_componentsarcoplasm
A0019430biological_processremoval of superoxide radicals
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0070062cellular_componentextracellular exosome
A0098809molecular_functionnitrite reductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue HEM A 201
ChainResidue
ALYS42
AILE99
ATYR103
ALEU104
A3QM206
AHOH329
AHOH331
AHOH359
AHOH407
APHE43
AARG45
ATHR67
AVAL68
ALEU89
ASER92
AHIS93
AHIS97

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 A 202
ChainResidue
ASER3
AGLU4
ATHR51
AGLU52
AALA53
AHOH308
AHOH344

site_idAC3
Number of Residues8
Detailsbinding site for residue SO4 A 203
ChainResidue
AALA15
AALA15
AALA15
ALYS16
ALYS16
ALYS16
AHOH437
AHOH437

site_idAC4
Number of Residues7
Detailsbinding site for residue SO4 A 204
ChainResidue
ALYS87
AGLY124
AALA125
AASP126
AGOL209
AHOH301
AHOH433

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 205
ChainResidue
ASER3
AGLY5
AHOH344
AHOH430
AHOH434

site_idAC6
Number of Residues3
Detailsbinding site for residue 3QM A 206
ChainResidue
AALA64
AVAL68
AHEM201

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL A 207
ChainResidue
AALA57
ASER58
AGLU59
AASP60
AHOH311
AHOH321
AHOH364

site_idAC8
Number of Residues3
Detailsbinding site for residue GOL A 208
ChainResidue
AARG31
ALYS98
AHIS113

site_idAC9
Number of Residues10
Detailsbinding site for residue GOL A 209
ChainResidue
AGLY121
AASN122
APHE123
AGLY124
AASP126
AALA127
ASO4204
AHOH348
AHOH353
AHOH379

site_idAD1
Number of Residues9
Detailsbinding site for residue GOL A 210
ChainResidue
ALYS78
AHIS81
AHIS82
AGLU83
AALA84
AGLU85
AGOL211
AHOH320
AHOH465

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL A 211
ChainResidue
AHIS48
AHIS81
AGOL210
AHOH354

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00238, ECO:0000269|PubMed:7463482, ECO:0007744|PDB:1MBO
ChainResidueDetails
AALA64

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: proximal binding residue => ECO:0000255|PROSITE-ProRule:PRU00238, ECO:0000269|PubMed:845959, ECO:0007744|PDB:4MBN, ECO:0007744|PDB:5MBN
ChainResidueDetails
AHIS93

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9QZ76
ChainResidueDetails
ASER3

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P04247
ChainResidueDetails
ATHR67

218853

PDB entries from 2024-04-24

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