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5KCR

Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
100000027biological_processribosomal large subunit assembly
100000049molecular_functiontRNA binding
100001558biological_processregulation of cell growth
100002181biological_processcytoplasmic translation
100003723molecular_functionRNA binding
100003735molecular_functionstructural constituent of ribosome
100005515molecular_functionprotein binding
100005737cellular_componentcytoplasm
100005840cellular_componentribosome
100006412biological_processtranslation
100019843molecular_functionrRNA binding
100022625cellular_componentcytosolic large ribosomal subunit
100042256biological_processcytosolic ribosome assembly
100043022molecular_functionribosome binding
100090070biological_processpositive regulation of ribosome biogenesis
101902626biological_processassembly of large subunit precursor of preribosome
101990904cellular_componentribonucleoprotein complex
110000027biological_processribosomal large subunit assembly
110002181biological_processcytoplasmic translation
110003723molecular_functionRNA binding
110003735molecular_functionstructural constituent of ribosome
110005515molecular_functionprotein binding
110005737cellular_componentcytoplasm
110005829cellular_componentcytosol
110005840cellular_componentribosome
110006412biological_processtranslation
110019843molecular_functionrRNA binding
110022625cellular_componentcytosolic large ribosomal subunit
111990904cellular_componentribonucleoprotein complex
120000027biological_processribosomal large subunit assembly
120002181biological_processcytoplasmic translation
120003723molecular_functionRNA binding
120003735molecular_functionstructural constituent of ribosome
120005737cellular_componentcytoplasm
120005840cellular_componentribosome
120006412biological_processtranslation
120019843molecular_functionrRNA binding
120022625cellular_componentcytosolic large ribosomal subunit
121990904cellular_componentribonucleoprotein complex
130000027biological_processribosomal large subunit assembly
130002181biological_processcytoplasmic translation
130003735molecular_functionstructural constituent of ribosome
130005737cellular_componentcytoplasm
130005840cellular_componentribosome
130006412biological_processtranslation
130015934cellular_componentlarge ribosomal subunit
130022625cellular_componentcytosolic large ribosomal subunit
131990904cellular_componentribonucleoprotein complex
150000027biological_processribosomal large subunit assembly
150000302biological_processresponse to reactive oxygen species
150002181biological_processcytoplasmic translation
150003735molecular_functionstructural constituent of ribosome
150005515molecular_functionprotein binding
150005737cellular_componentcytoplasm
150005829cellular_componentcytosol
150005840cellular_componentribosome
150006412biological_processtranslation
150009314biological_processresponse to radiation
150015934cellular_componentlarge ribosomal subunit
150022625cellular_componentcytosolic large ribosomal subunit
151990904cellular_componentribonucleoprotein complex
160000027biological_processribosomal large subunit assembly
160000049molecular_functiontRNA binding
160002181biological_processcytoplasmic translation
160003723molecular_functionRNA binding
160003735molecular_functionstructural constituent of ribosome
160005737cellular_componentcytoplasm
160005829cellular_componentcytosol
160005840cellular_componentribosome
160006412biological_processtranslation
160022625cellular_componentcytosolic large ribosomal subunit
160043229cellular_componentintracellular organelle
160046677biological_processresponse to antibiotic
161990904cellular_componentribonucleoprotein complex
170002181biological_processcytoplasmic translation
170003735molecular_functionstructural constituent of ribosome
170005515molecular_functionprotein binding
170005737cellular_componentcytoplasm
170005840cellular_componentribosome
170006412biological_processtranslation
170022625cellular_componentcytosolic large ribosomal subunit
171990904cellular_componentribonucleoprotein complex
180002181biological_processcytoplasmic translation
180003735molecular_functionstructural constituent of ribosome
180005737cellular_componentcytoplasm
180005840cellular_componentribosome
180006412biological_processtranslation
180022625cellular_componentcytosolic large ribosomal subunit
181990904cellular_componentribonucleoprotein complex
190002181biological_processcytoplasmic translation
190003735molecular_functionstructural constituent of ribosome
190005737cellular_componentcytoplasm
190005840cellular_componentribosome
190006412biological_processtranslation
190022625cellular_componentcytosolic large ribosomal subunit
190043229cellular_componentintracellular organelle
191990904cellular_componentribonucleoprotein complex
1D0000027biological_processribosomal large subunit assembly
1D0002181biological_processcytoplasmic translation
1D0003723molecular_functionRNA binding
1D0003735molecular_functionstructural constituent of ribosome
1D0005515molecular_functionprotein binding
1D0005737cellular_componentcytoplasm
1D0005829cellular_componentcytosol
1D0005840cellular_componentribosome
1D0006412biological_processtranslation
1D0008270molecular_functionzinc ion binding
1D0015934cellular_componentlarge ribosomal subunit
1D0016740molecular_functiontransferase activity
1D0019843molecular_functionrRNA binding
1D0022625cellular_componentcytosolic large ribosomal subunit
1D0032297biological_processnegative regulation of DNA-templated DNA replication initiation
1D1990082cellular_componentDnaA-L2 complex
1D1990904cellular_componentribonucleoprotein complex
1E0000027biological_processribosomal large subunit assembly
1E0002181biological_processcytoplasmic translation
1E0003723molecular_functionRNA binding
1E0003735molecular_functionstructural constituent of ribosome
1E0005515molecular_functionprotein binding
1E0005737cellular_componentcytoplasm
1E0005829cellular_componentcytosol
1E0005840cellular_componentribosome
1E0006412biological_processtranslation
1E0019843molecular_functionrRNA binding
1E0022625cellular_componentcytosolic large ribosomal subunit
1E1990904cellular_componentribonucleoprotein complex
1F0001070molecular_functionRNA-binding transcription regulator activity
1F0002181biological_processcytoplasmic translation
1F0003677molecular_functionDNA binding
1F0003723molecular_functionRNA binding
1F0003735molecular_functionstructural constituent of ribosome
1F0005515molecular_functionprotein binding
1F0005737cellular_componentcytoplasm
1F0005829cellular_componentcytosol
1F0005840cellular_componentribosome
1F0006353biological_processDNA-templated transcription termination
1F0006412biological_processtranslation
1F0006417biological_processregulation of translation
1F0015934cellular_componentlarge ribosomal subunit
1F0017148biological_processnegative regulation of translation
1F0019843molecular_functionrRNA binding
1F0022625cellular_componentcytosolic large ribosomal subunit
1F0030371molecular_functiontranslation repressor activity
1F0031555biological_processtranscriptional attenuation
1F0042255biological_processribosome assembly
1F0045892biological_processnegative regulation of DNA-templated transcription
1F0046677biological_processresponse to antibiotic
1F0048027molecular_functionmRNA 5'-UTR binding
1F0060698molecular_functionendoribonuclease inhibitor activity
1F1990904cellular_componentribonucleoprotein complex
1F2000766biological_processnegative regulation of cytoplasmic translation
1G0000049molecular_functiontRNA binding
1G0002181biological_processcytoplasmic translation
1G0003723molecular_functionRNA binding
1G0003735molecular_functionstructural constituent of ribosome
1G0005737cellular_componentcytoplasm
1G0005829cellular_componentcytosol
1G0005840cellular_componentribosome
1G0006412biological_processtranslation
1G0008097molecular_function5S rRNA binding
1G0019843molecular_functionrRNA binding
1G0022625cellular_componentcytosolic large ribosomal subunit
1G1990904cellular_componentribonucleoprotein complex
1H0000027biological_processribosomal large subunit assembly
1H0002181biological_processcytoplasmic translation
1H0003723molecular_functionRNA binding
1H0003735molecular_functionstructural constituent of ribosome
1H0005737cellular_componentcytoplasm
1H0005829cellular_componentcytosol
1H0005840cellular_componentribosome
1H0006412biological_processtranslation
1H0019843molecular_functionrRNA binding
1H0022625cellular_componentcytosolic large ribosomal subunit
1H0046677biological_processresponse to antibiotic
1H0070180molecular_functionlarge ribosomal subunit rRNA binding
1H1990904cellular_componentribonucleoprotein complex
1I0002181biological_processcytoplasmic translation
1I0003723molecular_functionRNA binding
1I0003735molecular_functionstructural constituent of ribosome
1I0005515molecular_functionprotein binding
1I0005737cellular_componentcytoplasm
1I0005829cellular_componentcytosol
1I0005840cellular_componentribosome
1I0006412biological_processtranslation
1I0019843molecular_functionrRNA binding
1I0022625cellular_componentcytosolic large ribosomal subunit
1I0070180molecular_functionlarge ribosomal subunit rRNA binding
1I1990904cellular_componentribonucleoprotein complex
1J0002181biological_processcytoplasmic translation
1J0003723molecular_functionRNA binding
1J0003735molecular_functionstructural constituent of ribosome
1J0003924molecular_functionGTPase activity
1J0005515molecular_functionprotein binding
1J0005737cellular_componentcytoplasm
1J0005829cellular_componentcytosol
1J0005840cellular_componentribosome
1J0006412biological_processtranslation
1J0006417biological_processregulation of translation
1J0015934cellular_componentlarge ribosomal subunit
1J0017148biological_processnegative regulation of translation
1J0019843molecular_functionrRNA binding
1J0022625cellular_componentcytosolic large ribosomal subunit
1J0043022molecular_functionribosome binding
1J0070180molecular_functionlarge ribosomal subunit rRNA binding
1J1990904cellular_componentribonucleoprotein complex
1K0000027biological_processribosomal large subunit assembly
1K0002181biological_processcytoplasmic translation
1K0003723molecular_functionRNA binding
1K0003735molecular_functionstructural constituent of ribosome
1K0005515molecular_functionprotein binding
1K0005737cellular_componentcytoplasm
1K0005829cellular_componentcytosol
1K0005840cellular_componentribosome
1K0006412biological_processtranslation
1K0006415biological_processtranslational termination
1K0015968biological_processstringent response
1K0019843molecular_functionrRNA binding
1K0022625cellular_componentcytosolic large ribosomal subunit
1K0070180molecular_functionlarge ribosomal subunit rRNA binding
1K1990904cellular_componentribonucleoprotein complex
1N0002181biological_processcytoplasmic translation
1N0003729molecular_functionmRNA binding
1N0003735molecular_functionstructural constituent of ribosome
1N0005737cellular_componentcytoplasm
1N0005829cellular_componentcytosol
1N0005840cellular_componentribosome
1N0006412biological_processtranslation
1N0008270molecular_functionzinc ion binding
1N0017148biological_processnegative regulation of translation
1N0022625cellular_componentcytosolic large ribosomal subunit
1N0043229cellular_componentintracellular organelle
1N0048027molecular_functionmRNA 5'-UTR binding
1N0070180molecular_functionlarge ribosomal subunit rRNA binding
1N1990904cellular_componentribonucleoprotein complex
1O0002181biological_processcytoplasmic translation
1O0003723molecular_functionRNA binding
1O0003735molecular_functionstructural constituent of ribosome
1O0005515molecular_functionprotein binding
1O0005737cellular_componentcytoplasm
1O0005829cellular_componentcytosol
1O0005840cellular_componentribosome
1O0006412biological_processtranslation
1O0015934cellular_componentlarge ribosomal subunit
1O0019843molecular_functionrRNA binding
1O0022625cellular_componentcytosolic large ribosomal subunit
1O0070180molecular_functionlarge ribosomal subunit rRNA binding
1O1990904cellular_componentribonucleoprotein complex
1P0002181biological_processcytoplasmic translation
1P0003723molecular_functionRNA binding
1P0003735molecular_functionstructural constituent of ribosome
1P0005515molecular_functionprotein binding
1P0005737cellular_componentcytoplasm
1P0005840cellular_componentribosome
1P0006412biological_processtranslation
1P0015934cellular_componentlarge ribosomal subunit
1P0019843molecular_functionrRNA binding
1P0022625cellular_componentcytosolic large ribosomal subunit
1P1990904cellular_componentribonucleoprotein complex
1Q0000027biological_processribosomal large subunit assembly
1Q0000049molecular_functiontRNA binding
1Q0002181biological_processcytoplasmic translation
1Q0003723molecular_functionRNA binding
1Q0003735molecular_functionstructural constituent of ribosome
1Q0005737cellular_componentcytoplasm
1Q0005840cellular_componentribosome
1Q0006412biological_processtranslation
1Q0019843molecular_functionrRNA binding
1Q0022625cellular_componentcytosolic large ribosomal subunit
1Q1990904cellular_componentribonucleoprotein complex
1R0000027biological_processribosomal large subunit assembly
1R0002181biological_processcytoplasmic translation
1R0003735molecular_functionstructural constituent of ribosome
1R0005515molecular_functionprotein binding
1R0005737cellular_componentcytoplasm
1R0005829cellular_componentcytosol
1R0005840cellular_componentribosome
1R0006412biological_processtranslation
1R0022625cellular_componentcytosolic large ribosomal subunit
1R1990904cellular_componentribonucleoprotein complex
1S0002181biological_processcytoplasmic translation
1S0003723molecular_functionRNA binding
1S0003735molecular_functionstructural constituent of ribosome
1S0005737cellular_componentcytoplasm
1S0005829cellular_componentcytosol
1S0005840cellular_componentribosome
1S0006412biological_processtranslation
1S0008097molecular_function5S rRNA binding
1S0019843molecular_functionrRNA binding
1S0022625cellular_componentcytosolic large ribosomal subunit
1S0043229cellular_componentintracellular organelle
1S1990904cellular_componentribonucleoprotein complex
1T0000027biological_processribosomal large subunit assembly
1T0002181biological_processcytoplasmic translation
1T0003723molecular_functionRNA binding
1T0003735molecular_functionstructural constituent of ribosome
1T0005737cellular_componentcytoplasm
1T0005829cellular_componentcytosol
1T0005840cellular_componentribosome
1T0006412biological_processtranslation
1T0019843molecular_functionrRNA binding
1T0022625cellular_componentcytosolic large ribosomal subunit
1T0070180molecular_functionlarge ribosomal subunit rRNA binding
1T1990904cellular_componentribonucleoprotein complex
1U0000900molecular_functionmRNA regulatory element binding translation repressor activity
1U0002181biological_processcytoplasmic translation
1U0003723molecular_functionRNA binding
1U0003729molecular_functionmRNA binding
1U0003735molecular_functionstructural constituent of ribosome
1U0005737cellular_componentcytoplasm
1U0005829cellular_componentcytosol
1U0005840cellular_componentribosome
1U0006412biological_processtranslation
1U0017148biological_processnegative regulation of translation
1U0019843molecular_functionrRNA binding
1U0022625cellular_componentcytosolic large ribosomal subunit
1U0070180molecular_functionlarge ribosomal subunit rRNA binding
1U1990904cellular_componentribonucleoprotein complex
1V0002181biological_processcytoplasmic translation
1V0003723molecular_functionRNA binding
1V0003735molecular_functionstructural constituent of ribosome
1V0005737cellular_componentcytoplasm
1V0005829cellular_componentcytosol
1V0005840cellular_componentribosome
1V0006412biological_processtranslation
1V0019843molecular_functionrRNA binding
1V0022625cellular_componentcytosolic large ribosomal subunit
1V0043229cellular_componentintracellular organelle
1V1990904cellular_componentribonucleoprotein complex
1W0002181biological_processcytoplasmic translation
1W0003723molecular_functionRNA binding
1W0003735molecular_functionstructural constituent of ribosome
1W0005515molecular_functionprotein binding
1W0005737cellular_componentcytoplasm
1W0005829cellular_componentcytosol
1W0005840cellular_componentribosome
1W0006412biological_processtranslation
1W0015934cellular_componentlarge ribosomal subunit
1W0019843molecular_functionrRNA binding
1W0022625cellular_componentcytosolic large ribosomal subunit
1W0042255biological_processribosome assembly
1W0042256biological_processcytosolic ribosome assembly
1W0046677biological_processresponse to antibiotic
1W0070180molecular_functionlarge ribosomal subunit rRNA binding
1W1902626biological_processassembly of large subunit precursor of preribosome
1W1990904cellular_componentribonucleoprotein complex
1X0000027biological_processribosomal large subunit assembly
1X0002181biological_processcytoplasmic translation
1X0003723molecular_functionRNA binding
1X0003735molecular_functionstructural constituent of ribosome
1X0005515molecular_functionprotein binding
1X0005737cellular_componentcytoplasm
1X0005840cellular_componentribosome
1X0006412biological_processtranslation
1X0019843molecular_functionrRNA binding
1X0022625cellular_componentcytosolic large ribosomal subunit
1X1990904cellular_componentribonucleoprotein complex
1Y0000027biological_processribosomal large subunit assembly
1Y0002181biological_processcytoplasmic translation
1Y0003723molecular_functionRNA binding
1Y0003735molecular_functionstructural constituent of ribosome
1Y0005515molecular_functionprotein binding
1Y0005737cellular_componentcytoplasm
1Y0005829cellular_componentcytosol
1Y0005840cellular_componentribosome
1Y0006412biological_processtranslation
1Y0019843molecular_functionrRNA binding
1Y0022625cellular_componentcytosolic large ribosomal subunit
1Y0070180molecular_functionlarge ribosomal subunit rRNA binding
1Y1990904cellular_componentribonucleoprotein complex
1Z0000027biological_processribosomal large subunit assembly
1Z0002181biological_processcytoplasmic translation
1Z0003723molecular_functionRNA binding
1Z0003735molecular_functionstructural constituent of ribosome
1Z0005737cellular_componentcytoplasm
1Z0005829cellular_componentcytosol
1Z0005840cellular_componentribosome
1Z0006412biological_processtranslation
1Z0008097molecular_function5S rRNA binding
1Z0009314biological_processresponse to radiation
1Z0017148biological_processnegative regulation of translation
1Z0019843molecular_functionrRNA binding
1Z0022625cellular_componentcytosolic large ribosomal subunit
1Z1990904cellular_componentribonucleoprotein complex
1b0000028biological_processribosomal small subunit assembly
1b0002181biological_processcytoplasmic translation
1b0003735molecular_functionstructural constituent of ribosome
1b0005515molecular_functionprotein binding
1b0005737cellular_componentcytoplasm
1b0005840cellular_componentribosome
1b0006412biological_processtranslation
1b0008270molecular_functionzinc ion binding
1b0015935cellular_componentsmall ribosomal subunit
1b0022627cellular_componentcytosolic small ribosomal subunit
1b1990904cellular_componentribonucleoprotein complex
1c0000028biological_processribosomal small subunit assembly
1c0002181biological_processcytoplasmic translation
1c0003676molecular_functionnucleic acid binding
1c0003723molecular_functionRNA binding
1c0003729molecular_functionmRNA binding
1c0003735molecular_functionstructural constituent of ribosome
1c0005737cellular_componentcytoplasm
1c0005829cellular_componentcytosol
1c0005840cellular_componentribosome
1c0006412biological_processtranslation
1c0019843molecular_functionrRNA binding
1c0022627cellular_componentcytosolic small ribosomal subunit
1c1990904cellular_componentribonucleoprotein complex
1d0000028biological_processribosomal small subunit assembly
1d0000900molecular_functionmRNA regulatory element binding translation repressor activity
1d0002181biological_processcytoplasmic translation
1d0003723molecular_functionRNA binding
1d0003735molecular_functionstructural constituent of ribosome
1d0005515molecular_functionprotein binding
1d0005737cellular_componentcytoplasm
1d0005829cellular_componentcytosol
1d0005840cellular_componentribosome
1d0006353biological_processDNA-templated transcription termination
1d0006412biological_processtranslation
1d0006417biological_processregulation of translation
1d0015935cellular_componentsmall ribosomal subunit
1d0019843molecular_functionrRNA binding
1d0022627cellular_componentcytosolic small ribosomal subunit
1d0031564biological_processtranscription antitermination
1d0042254biological_processribosome biogenesis
1d0042274biological_processribosomal small subunit biogenesis
1d0045947biological_processnegative regulation of translational initiation
1d0046677biological_processresponse to antibiotic
1d0048027molecular_functionmRNA 5'-UTR binding
1d1990145biological_processmaintenance of translational fidelity
1d1990904cellular_componentribonucleoprotein complex
1e0000028biological_processribosomal small subunit assembly
1e0002181biological_processcytoplasmic translation
1e0003723molecular_functionRNA binding
1e0003735molecular_functionstructural constituent of ribosome
1e0005515molecular_functionprotein binding
1e0005737cellular_componentcytoplasm
1e0005829cellular_componentcytosol
1e0005840cellular_componentribosome
1e0006412biological_processtranslation
1e0015935cellular_componentsmall ribosomal subunit
1e0019843molecular_functionrRNA binding
1e0022627cellular_componentcytosolic small ribosomal subunit
1e0043229cellular_componentintracellular organelle
1e0046677biological_processresponse to antibiotic
1e1990145biological_processmaintenance of translational fidelity
1e1990904cellular_componentribonucleoprotein complex
1f0002181biological_processcytoplasmic translation
1f0003723molecular_functionRNA binding
1f0003735molecular_functionstructural constituent of ribosome
1f0005515molecular_functionprotein binding
1f0005737cellular_componentcytoplasm
1f0005829cellular_componentcytosol
1f0005840cellular_componentribosome
1f0006412biological_processtranslation
1f0019843molecular_functionrRNA binding
1f0022627cellular_componentcytosolic small ribosomal subunit
1f0043229cellular_componentintracellular organelle
1f0048027molecular_functionmRNA 5'-UTR binding
1f0070181molecular_functionsmall ribosomal subunit rRNA binding
1f1990904cellular_componentribonucleoprotein complex
1g0000028biological_processribosomal small subunit assembly
1g0000049molecular_functiontRNA binding
1g0002181biological_processcytoplasmic translation
1g0003723molecular_functionRNA binding
1g0003729molecular_functionmRNA binding
1g0003735molecular_functionstructural constituent of ribosome
1g0005515molecular_functionprotein binding
1g0005737cellular_componentcytoplasm
1g0005829cellular_componentcytosol
1g0005840cellular_componentribosome
1g0006412biological_processtranslation
1g0015935cellular_componentsmall ribosomal subunit
1g0016020cellular_componentmembrane
1g0017148biological_processnegative regulation of translation
1g0019843molecular_functionrRNA binding
1g0022627cellular_componentcytosolic small ribosomal subunit
1g1990904cellular_componentribonucleoprotein complex
1h0000028biological_processribosomal small subunit assembly
1h0002181biological_processcytoplasmic translation
1h0003723molecular_functionRNA binding
1h0003735molecular_functionstructural constituent of ribosome
1h0005737cellular_componentcytoplasm
1h0005829cellular_componentcytosol
1h0005840cellular_componentribosome
1h0006412biological_processtranslation
1h0006417biological_processregulation of translation
1h0019843molecular_functionrRNA binding
1h0022627cellular_componentcytosolic small ribosomal subunit
1h0043229cellular_componentintracellular organelle
1h0043488biological_processregulation of mRNA stability
1h1990904cellular_componentribonucleoprotein complex
1i0000049molecular_functiontRNA binding
1i0002181biological_processcytoplasmic translation
1i0003723molecular_functionRNA binding
1i0003735molecular_functionstructural constituent of ribosome
1i0005737cellular_componentcytoplasm
1i0005829cellular_componentcytosol
1i0005840cellular_componentribosome
1i0006412biological_processtranslation
1i0022627cellular_componentcytosolic small ribosomal subunit
1i0043229cellular_componentintracellular organelle
1i1990904cellular_componentribonucleoprotein complex
1j0000049molecular_functiontRNA binding
1j0001072molecular_functiontranscription antitermination factor activity, RNA binding
1j0002181biological_processcytoplasmic translation
1j0003723molecular_functionRNA binding
1j0003735molecular_functionstructural constituent of ribosome
1j0005515molecular_functionprotein binding
1j0005737cellular_componentcytoplasm
1j0005829cellular_componentcytosol
1j0005840cellular_componentribosome
1j0006412biological_processtranslation
1j0008023cellular_componenttranscription elongation factor complex
1j0015935cellular_componentsmall ribosomal subunit
1j0022627cellular_componentcytosolic small ribosomal subunit
1j0031564biological_processtranscription antitermination
1j0032784biological_processregulation of DNA-templated transcription elongation
1j0042254biological_processribosome biogenesis
1j1990904cellular_componentribonucleoprotein complex
1k0002181biological_processcytoplasmic translation
1k0003723molecular_functionRNA binding
1k0003735molecular_functionstructural constituent of ribosome
1k0005515molecular_functionprotein binding
1k0005737cellular_componentcytoplasm
1k0005829cellular_componentcytosol
1k0005840cellular_componentribosome
1k0006412biological_processtranslation
1k0019843molecular_functionrRNA binding
1k0022627cellular_componentcytosolic small ribosomal subunit
1k0070181molecular_functionsmall ribosomal subunit rRNA binding
1k1990904cellular_componentribonucleoprotein complex
1l0000049molecular_functiontRNA binding
1l0000372biological_processGroup I intron splicing
1l0002181biological_processcytoplasmic translation
1l0003723molecular_functionRNA binding
1l0003735molecular_functionstructural constituent of ribosome
1l0005515molecular_functionprotein binding
1l0005737cellular_componentcytoplasm
1l0005829cellular_componentcytosol
1l0005840cellular_componentribosome
1l0006412biological_processtranslation
1l0015935cellular_componentsmall ribosomal subunit
1l0019843molecular_functionrRNA binding
1l0022627cellular_componentcytosolic small ribosomal subunit
1l0033120biological_processpositive regulation of RNA splicing
1l0034336molecular_functionmisfolded RNA binding
1l0034337biological_processRNA folding
1l0046677biological_processresponse to antibiotic
1l1990145biological_processmaintenance of translational fidelity
1l1990904cellular_componentribonucleoprotein complex
1m0000049molecular_functiontRNA binding
1m0002181biological_processcytoplasmic translation
1m0003676molecular_functionnucleic acid binding
1m0003723molecular_functionRNA binding
1m0003735molecular_functionstructural constituent of ribosome
1m0005515molecular_functionprotein binding
1m0005737cellular_componentcytoplasm
1m0005829cellular_componentcytosol
1m0005840cellular_componentribosome
1m0006412biological_processtranslation
1m0015935cellular_componentsmall ribosomal subunit
1m0019843molecular_functionrRNA binding
1m0022627cellular_componentcytosolic small ribosomal subunit
1m1990904cellular_componentribonucleoprotein complex
1n0000028biological_processribosomal small subunit assembly
1n0000049molecular_functiontRNA binding
1n0002181biological_processcytoplasmic translation
1n0003735molecular_functionstructural constituent of ribosome
1n0005737cellular_componentcytoplasm
1n0005840cellular_componentribosome
1n0006412biological_processtranslation
1n0015935cellular_componentsmall ribosomal subunit
1n0019843molecular_functionrRNA binding
1n0022627cellular_componentcytosolic small ribosomal subunit
1n0043229cellular_componentintracellular organelle
1n1990904cellular_componentribonucleoprotein complex
1o0000028biological_processribosomal small subunit assembly
1o0002181biological_processcytoplasmic translation
1o0003723molecular_functionRNA binding
1o0003735molecular_functionstructural constituent of ribosome
1o0005737cellular_componentcytoplasm
1o0005829cellular_componentcytosol
1o0005840cellular_componentribosome
1o0006412biological_processtranslation
1o0006417biological_processregulation of translation
1o0019843molecular_functionrRNA binding
1o0022627cellular_componentcytosolic small ribosomal subunit
1o0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
1o0043229cellular_componentintracellular organelle
1o0070181molecular_functionsmall ribosomal subunit rRNA binding
1o1903231molecular_functionmRNA base-pairing translational repressor activity
1o1990904cellular_componentribonucleoprotein complex
1p0000028biological_processribosomal small subunit assembly
1p0000400molecular_functionfour-way junction DNA binding
1p0002181biological_processcytoplasmic translation
1p0003735molecular_functionstructural constituent of ribosome
1p0004518molecular_functionnuclease activity
1p0004519molecular_functionendonuclease activity
1p0004520molecular_functionDNA endonuclease activity
1p0005737cellular_componentcytoplasm
1p0005840cellular_componentribosome
1p0006259biological_processDNA metabolic process
1p0006412biological_processtranslation
1p0015935cellular_componentsmall ribosomal subunit
1p0016787molecular_functionhydrolase activity
1p0022627cellular_componentcytosolic small ribosomal subunit
1p0043229cellular_componentintracellular organelle
1p1990904cellular_componentribonucleoprotein complex
1q0000028biological_processribosomal small subunit assembly
1q0002181biological_processcytoplasmic translation
1q0003723molecular_functionRNA binding
1q0003735molecular_functionstructural constituent of ribosome
1q0005737cellular_componentcytoplasm
1q0005840cellular_componentribosome
1q0006412biological_processtranslation
1q0008270molecular_functionzinc ion binding
1q0019843molecular_functionrRNA binding
1q0022627cellular_componentcytosolic small ribosomal subunit
1q0046677biological_processresponse to antibiotic
1q0060090molecular_functionmolecular adaptor activity
1q0070181molecular_functionsmall ribosomal subunit rRNA binding
1q1990904cellular_componentribonucleoprotein complex
1r0002181biological_processcytoplasmic translation
1r0003723molecular_functionRNA binding
1r0003735molecular_functionstructural constituent of ribosome
1r0005515molecular_functionprotein binding
1r0005737cellular_componentcytoplasm
1r0005829cellular_componentcytosol
1r0005840cellular_componentribosome
1r0006412biological_processtranslation
1r0019843molecular_functionrRNA binding
1r0022627cellular_componentcytosolic small ribosomal subunit
1r0048027molecular_functionmRNA 5'-UTR binding
1r0070181molecular_functionsmall ribosomal subunit rRNA binding
1r1990904cellular_componentribonucleoprotein complex
1s0000028biological_processribosomal small subunit assembly
1s0000049molecular_functiontRNA binding
1s0002181biological_processcytoplasmic translation
1s0003723molecular_functionRNA binding
1s0003735molecular_functionstructural constituent of ribosome
1s0005737cellular_componentcytoplasm
1s0005829cellular_componentcytosol
1s0005840cellular_componentribosome
1s0006412biological_processtranslation
1s0015935cellular_componentsmall ribosomal subunit
1s0019843molecular_functionrRNA binding
1s0022627cellular_componentcytosolic small ribosomal subunit
1s0043229cellular_componentintracellular organelle
1s1990904cellular_componentribonucleoprotein complex
1t0000028biological_processribosomal small subunit assembly
1t0002181biological_processcytoplasmic translation
1t0003723molecular_functionRNA binding
1t0003735molecular_functionstructural constituent of ribosome
1t0005737cellular_componentcytoplasm
1t0005829cellular_componentcytosol
1t0005840cellular_componentribosome
1t0006412biological_processtranslation
1t0008073molecular_functionornithine decarboxylase inhibitor activity
1t0015935cellular_componentsmall ribosomal subunit
1t0019843molecular_functionrRNA binding
1t0022627cellular_componentcytosolic small ribosomal subunit
1t0070181molecular_functionsmall ribosomal subunit rRNA binding
1t1990904cellular_componentribonucleoprotein complex
1u0000028biological_processribosomal small subunit assembly
1u0002181biological_processcytoplasmic translation
1u0003723molecular_functionRNA binding
1u0003735molecular_functionstructural constituent of ribosome
1u0005737cellular_componentcytoplasm
1u0005829cellular_componentcytosol
1u0005840cellular_componentribosome
1u0006412biological_processtranslation
1u0019843molecular_functionrRNA binding
1u0022627cellular_componentcytosolic small ribosomal subunit
1u1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 6UQ 1A 3001
ChainResidue
1AA2469
1AG2536
1HLYS175
1QTHR54
1QARG55
1AG2470
1AA2471
1AG2472
1AU2479
1AC2480
1AG2529
1AA2530
1AG2535

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN 19 101
ChainResidue
19CYS11
19CYS14
19CYS27
19HIS33

Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
1XMET1-LYS66

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
12GLN39-VAL53

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
1oLEU39-TYR69

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
1lLYS43-ARG50

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
1RILE34-LYS56

site_idPS01109
Number of Residues35
DetailsRIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
ChainResidueDetails
1JLYS8-ARG42

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
1YASP8-VAL25

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
1HPRO154-VAL162

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
1EPHE101-ARG124

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
1DPRO218-ASP229

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
1QLYS58-PRO69

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
1QARG81-TRP92

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
ChainResidueDetails
1IGLY13-THR40

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
1cALA163-GLY197

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
13THR23-VAL55

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
1rILE21-ILE44

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
1pVAL2-ALA11

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
1qGLY56-SER68

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
ChainResidueDetails
1kILE97-ASN119

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
1KARG127-ASP142

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
1gSER20-ALA46

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
1VVAL72-THR94

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
16TYR21-ASP40

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
1PLYS109-GLY139

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
10GLY34-GLY48

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
1XLYS81-VAL96

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
1jALA29-THR44

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
1uASP13-LYS25

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
1WLYS83-VAL107

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
1ULYS54-ARG70

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
1iGLY69-LEU87

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
17LYS2-ARG21

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
1eGLY28-ILE60

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
18LYS5-HIS31

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
1mPRO10-GLY38

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
1mARG87-GLN100

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
1nARG63-ARG85

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
1bMET6-GLY17

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
1bPRO158-PRO182

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
1sASN53-THR77

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
1NVAL105-GLY127

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
19CYS11-GLN37

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
1fGLY43-ASN52

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
1dLEU94-VAL118

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
1hGLY100-ARG117

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
1GLEU57-SER73

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
1TVAL86-ARG101

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
1OALA60-LEU86

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0000269|PubMed:776663
ChainResidueDetails
1rALA2
1JLYS105
1ILYS112

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
1lLYS108
1KLYS40

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
1KLYS72
1KLYS81

218853

PDB entries from 2024-04-24

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