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5KCM

Crystal structure of iron-sulfur cluster containing photolyase PhrB mutant I51W

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000719biological_processphotoreactive repair
A0003677molecular_functionDNA binding
A0003914molecular_functionDNA (6-4) photolyase activity
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016829molecular_functionlyase activity
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
A0071949molecular_functionFAD binding
B0000166molecular_functionnucleotide binding
B0000719biological_processphotoreactive repair
B0003677molecular_functionDNA binding
B0003914molecular_functionDNA (6-4) photolyase activity
B0006281biological_processDNA repair
B0006974biological_processDNA damage response
B0016829molecular_functionlyase activity
B0046872molecular_functionmetal ion binding
B0051536molecular_functioniron-sulfur cluster binding
B0051539molecular_function4 iron, 4 sulfur cluster binding
B0071949molecular_functionFAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue FAD A 601
ChainResidue
APHE249
AILE307
AARG311
ATYR363
AALA364
AHIS366
AARG369
ATYR391
AASP397
AALA398
AVAL402
AHIS265
AGLU403
AASN406
AVAL407
AHOH721
AHOH802
AHOH809
AHOH813
AHOH836
ASER266
ALEU267
ALEU268
ASER269
AASN273
APHE303
AGLN306

site_idAC2
Number of Residues5
Detailsbinding site for residue SF4 A 602
ChainResidue
ACYS350
AILE431
ACYS438
ACYS441
ACYS454

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 603
ChainResidue
AALA321
APHE418
AHOH743
BARG140
BGOL605

site_idAC4
Number of Residues26
Detailsbinding site for residue FAD B 601
ChainResidue
BPHE249
BHIS265
BSER266
BLEU267
BLEU268
BSER269
BASN273
BPHE303
BGLN306
BILE307
BARG311
BTYR363
BALA364
BHIS366
BARG369
BTYR391
BASP397
BALA398
BVAL402
BGLU403
BASN406
BHOH703
BHOH711
BHOH764
BHOH825
BHOH846

site_idAC5
Number of Residues4
Detailsbinding site for residue SF4 B 602
ChainResidue
BCYS350
BCYS438
BCYS441
BCYS454

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL B 603
ChainResidue
BLEU8
BGLY9
BPHE83
BGLU106
BHOH832

site_idAC7
Number of Residues4
Detailsbinding site for residue GOL B 604
ChainResidue
BSER427
BARG448
BASN457
BTRP461

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL B 605
ChainResidue
AARG140
AGOL603
BALA321
BHOH821

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues48
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"23589886","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4DJA","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

249524

PDB entries from 2026-02-18

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