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5K1X

Catalytic domain of polyspecific pyrrolysyl-tRNA synthetase mutant Y306A/N346A/C348A/Y384F in complex with AMPPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue ANP A 501
ChainResidue
AARG330
ASER399
AGLY421
AGLY423
AARG426
AMG502
AMG503
AHOH604
AHOH620
AHOH636
AHOH643
AGLU332
AHOH647
AHOH651
AHOH683
AHOH684
AHOH696
AHOH703
AHOH709
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 502
ChainResidue
AGLU396
ASER399
AANP501
AHOH636
AHOH651

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 503
ChainResidue
AANP501
AHOH620
AHOH643
AHOH647
AHOH703

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 504
ChainResidue
ATYR242
ALYS245
AGLU249
ALEU428
ALYS431
AHIS432

site_idAC5
Number of Residues4
Detailsbinding site for residue PEG A 505
ChainResidue
ALEU309
AILE413
ATRP417
AHOH644

site_idAC6
Number of Residues4
Detailsbinding site for residue CL A 506
ChainResidue
AMET300
ALEU301
AALA302
AMET344

223532

PDB entries from 2024-08-07

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