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5K1L

Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0015671biological_processoxygen transport
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004601molecular_functionperoxidase activity
B0005344molecular_functionoxygen carrier activity
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue HEM A 201
ChainResidue
AGLU31
ALEU92
AASN96
APHE97
ALEU127
ABZI202
AASN34
APHE35
AHIS55
ALYS58
AVAL59
AMET86
AGLN88
AHIS89

site_idAC2
Number of Residues6
Detailsbinding site for residue BZI A 202
ChainResidue
APHE21
APHE35
AVAL59
ALEU100
AHEM201
AHOH345

site_idAC3
Number of Residues16
Detailsbinding site for residue HEM B 201
ChainResidue
BGLU31
BASN34
BPHE35
BHIS55
BVAL59
BMET63
BMET86
BGLN88
BHIS89
BLEU92
BASN96
BPHE97
BBZI202
BHOH312
BHOH352
BHOH378

site_idAC4
Number of Residues6
Detailsbinding site for residue BZI B 202
ChainResidue
BPHE21
BPHE35
BVAL59
BLEU100
BHEM201
BHOH352

site_idAC5
Number of Residues10
Detailsbinding site for residue SO4 B 204
ChainResidue
ALYS32
AVAL39
AGLY40
AHOH302
BGLY1
BPHE2
BLYS3
BHOH318
BHOH338
BHOH373

site_idAC6
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

site_idAC7
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

site_idAC8
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360

site_idAC9
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

site_idAD1
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

site_idAD2
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

site_idAD3
Number of Residues19
Detailsbinding site for residues SO4 A 203 and SO4 B 203
ChainResidue
AGLY1
AGLY1
APHE2
APHE2
ALYS3
ALYS3
AHOH338
AHOH338
AHOH360
AHOH360
AHOH369
AHOH369
AHOH379
BLYS32
BLYS32
BGLY40
BGLY40
BHOH367
BHOH367

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PDB entries from 2024-07-17

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