5K1L
Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-24 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9282 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.790, 68.300, 68.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.410 - 1.080 |
R-factor | 0.1521 |
Rwork | 0.151 |
R-free | 0.17720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ixf |
RMSD bond length | 0.019 |
RMSD bond angle | 1.751 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.410 | 1.110 |
High resolution limit [Å] | 1.080 | 1.080 |
Rmerge | 0.049 | 1.440 |
Number of reflections | 122447 | |
<I/σ(I)> | 16.7 | 1.2 |
Completeness [%] | 99.8 | 99.8 |
Redundancy | 6.9 | 5.5 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 15 % PEG 4000 150 mM Ammonium sulfate |