Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5K1L

Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-01-24
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.9282
Spacegroup nameP 21 21 21
Unit cell lengths60.790, 68.300, 68.530
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.410 - 1.080
R-factor0.1521
Rwork0.151
R-free0.17720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ixf
RMSD bond length0.019
RMSD bond angle1.751
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.4101.110
High resolution limit [Å]1.0801.080
Rmerge0.0491.440
Number of reflections122447
<I/σ(I)>16.71.2
Completeness [%]99.899.8
Redundancy6.95.5
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27715 % PEG 4000 150 mM Ammonium sulfate

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon