5JWB

Structure of NDH2 from plasmodium falciparum in complex with NADH

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003954	molecular_function	NADH dehydrogenase activity
A	0003960	molecular_function	NADPH:quinone reductase activity
A	0005739	cellular_component	mitochondrion
A	0006116	biological_process	NADH oxidation
A	0016491	molecular_function	oxidoreductase activity
A	0046872	molecular_function	metal ion binding
A	0050136	molecular_function	NADH:ubiquinone reductase (non-electrogenic) activity
H	0000166	molecular_function	nucleotide binding
H	0003954	molecular_function	NADH dehydrogenase activity
H	0003960	molecular_function	NADPH:quinone reductase activity
H	0005739	cellular_component	mitochondrion
H	0006116	biological_process	NADH oxidation
H	0016491	molecular_function	oxidoreductase activity
H	0046872	molecular_function	metal ion binding
H	0050136	molecular_function	NADH:ubiquinone reductase (non-electrogenic) activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	30
Details	binding site for residue FAD A 601

Chain	Residue
A	GLY47
A	THR78
A	PRO79
A	CYS117
A	ALA147
A	VAL148
A	GLY149
A	LYS168
A	LEU316
A	GLY353
A	ASP354
A	SER48
A	PRO434
A	THR435
A	ALA436
A	GLN437
A	ALA439
A	TYR504
A	MG602
A	MG603
A	MG604
A	MG605
A	GLY49
A	NAD608
A	TRP50
A	GLY51
A	ILE69
A	SER70
A	PRO71
A	ARG72

---

site_id	AC2
Number of Residues	8
Details	binding site for residue MG A 602

Chain	Residue
A	ALA147
A	VAL148
A	GLY149
A	ILE352
A	GLY353
A	ASP354
A	CYS355
A	FAD601

---

site_id	AC3
Number of Residues	4
Details	binding site for residue MG A 603

Chain	Residue
A	GLY49
A	GLY52
A	ALA147
A	FAD601

---

site_id	AC4
Number of Residues	4
Details	binding site for residue MG A 604

Chain	Residue
A	GLY49
A	ARG72
A	THR76
A	FAD601

---

site_id	AC5
Number of Residues	5
Details	binding site for residue MG A 605

Chain	Residue
A	GLY149
A	ALA150
A	LYS168
A	ASP354
A	FAD601

---

site_id	AC6
Number of Residues	4
Details	binding site for residue TRT A 606

Chain	Residue
A	LYS501
A	ILE505
A	PHE521
A	TRT607

---

site_id	AC7
Number of Residues	2
Details	binding site for residue TRT A 607

Chain	Residue
A	ARG514
A	TRT606

---

site_id	AC8
Number of Residues	17
Details	binding site for residue NAD A 608

Chain	Residue
A	PHE155
A	VAL206
A	GLY207
A	GLY209
A	PRO210
A	THR211
A	GLU214
A	GLU244
A	GLY245
A	TYR276
A	TYR277
A	VAL278
A	SER309
A	PRO434
A	LEU473
A	FAD601
H	LYS294

---

site_id	AC9
Number of Residues	4
Details	binding site for residue TRT A 609

Chain	Residue
A	TYR527
H	ILE505
H	TRP511
H	PHE518

---

site_id	AD1
Number of Residues	3
Details	binding site for residue ACT A 610

Chain	Residue
A	ASN224
A	LEU268
A	ASN269

---

site_id	AD2
Number of Residues	4
Details	binding site for residue ACT A 611

Chain	Residue
A	ASN230
A	LYS232
A	ASP233
H	ARG99

---

site_id	AD3
Number of Residues	6
Details	binding site for residue ACT A 612

Chain	Residue
A	GLY87
A	THR88
A	ASP520
A	LYS523
A	THR524
A	ACT613

---

site_id	AD4
Number of Residues	2
Details	binding site for residue ACT A 613

Chain	Residue
A	ARG177
A	ACT612

---

site_id	AD5
Number of Residues	6
Details	binding site for residue CXS A 614

Chain	Residue
A	ASP221
A	LYS225
A	TYR475
A	HIS479
A	TRP500
A	ARG529

---

site_id	AD6
Number of Residues	4
Details	binding site for residue TRT H 601

Chain	Residue
A	TRP511
A	PHE515
A	PHE518
H	TYR527

---

site_id	AD7
Number of Residues	29
Details	binding site for residue FAD H 602

Chain	Residue
H	GLY47
H	SER48
H	GLY49
H	TRP50
H	GLY51
H	ILE69
H	SER70
H	PRO71
H	ARG72
H	THR78
H	PRO79
H	CYS117
H	ALA147
H	VAL148
H	GLY149
H	VAL167
H	GLY353
H	ASP354
H	PRO434
H	THR435
H	ALA436
H	GLN437
H	ALA439
H	TYR504
H	MG603
H	MG604
H	MG605
H	MG606
H	NAD607

---

site_id	AD8
Number of Residues	8
Details	binding site for residue MG H 603

Chain	Residue
H	ALA147
H	VAL148
H	GLY149
H	ILE352
H	GLY353
H	ASP354
H	CYS355
H	FAD602

---

site_id	AD9
Number of Residues	5
Details	binding site for residue MG H 604

Chain	Residue
H	GLY49
H	GLY51
H	GLY52
H	ALA147
H	FAD602

---

site_id	AE1
Number of Residues	4
Details	binding site for residue MG H 605

Chain	Residue
H	GLY49
H	ARG72
H	THR76
H	FAD602

---

site_id	AE2
Number of Residues	5
Details	binding site for residue MG H 606

Chain	Residue
H	GLY149
H	ALA150
H	LYS168
H	ASP354
H	FAD602

---

site_id	AE3
Number of Residues	17
Details	binding site for residue NAD H 607

Chain	Residue
A	LYS294
H	PHE155
H	VAL206
H	GLY207
H	GLY209
H	PRO210
H	THR211
H	GLU214
H	GLU244
H	GLY245
H	TYR276
H	TYR277
H	VAL278
H	SER309
H	PRO434
H	LEU473
H	FAD602

---

site_id	AE4
Number of Residues	5
Details	binding site for residue TRT H 608

Chain	Residue
H	LYS501
H	PHE518
H	PHE521
H	ILE522
H	TRT609

---

site_id	AE5
Number of Residues	3
Details	binding site for residue TRT H 609

Chain	Residue
H	GLN506
H	ARG514
H	TRT608

---

site_id	AE6
Number of Residues	3
Details	binding site for residue ACT H 610

Chain	Residue
H	ASN224
H	LEU268
H	ASN269

---

site_id	AE7
Number of Residues	1
Details	binding site for residue ACT H 611

Chain	Residue
H	LYS162

---

site_id	AE8
Number of Residues	5
Details	binding site for residue CXS H 613

Chain	Residue
H	ASP221
H	LYS225
H	HIS479
H	TRP500
H	ARG529

---