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5JSR

New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent Dimethylsulfoniopropionate Lyase DddQ

Functional Information from GO Data
ChainGOidnamespacecontents
A0016829molecular_functionlyase activity
A0046872molecular_functionmetal ion binding
A0047869molecular_functiondimethylpropiothetin dethiomethylase activity
B0016829molecular_functionlyase activity
B0046872molecular_functionmetal ion binding
B0047869molecular_functiondimethylpropiothetin dethiomethylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue FE A 301
ChainResidue
AHIS125
AGLU129
ATYR131
AHIS163
AAKR302

site_idAC2
Number of Residues5
Detailsbinding site for residue AKR A 302
ChainResidue
AFE301
ATYR120
AHIS125
AGLU129
ATYR131

site_idAC3
Number of Residues2
Detailsbinding site for residue BR A 303
ChainResidue
AGLY53
AGLY136

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 304
ChainResidue
AARG38
AARG75
AHOH465

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 305
ChainResidue
AALA32
AGLY34
AHOH427

site_idAC6
Number of Residues3
Detailsbinding site for residue CL A 306
ChainResidue
ATYR113
APRO171
AHOH471

site_idAC7
Number of Residues5
Detailsbinding site for residue FE B 301
ChainResidue
BHIS125
BGLU129
BTYR131
BHIS163
BAKR302

site_idAC8
Number of Residues6
Detailsbinding site for residue AKR B 302
ChainResidue
BTYR120
BHIS123
BHIS125
BGLU129
BTYR131
BFE301

site_idAC9
Number of Residues2
Detailsbinding site for residue BR B 303
ChainResidue
BGLY53
BGLY136

site_idAD1
Number of Residues2
Detailsbinding site for residue CL B 304
ChainResidue
BARG38
BARG75

site_idAD2
Number of Residues2
Detailsbinding site for residue CL B 305
ChainResidue
BTYR113
BHOH428

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:24395783, ECO:0007744|PDB:4LA2, ECO:0007744|PDB:4LA3
ChainResidueDetails
AHIS125
AGLU129
AHIS163
BHIS125
BGLU129
BHIS163

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:24395783, ECO:0007744|PDB:4LA2
ChainResidueDetails
ATYR131
BTYR131

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PDB entries from 2024-10-16

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