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5JSG

Crystal structure of Spindlin1 bound to compound EML405

Functional Information from GO Data
ChainGOidnamespacecontents
A0007276biological_processgamete generation
B0007276biological_processgamete generation
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue 6P9 A 301
ChainResidue
ATRP62
AHOH435
ATRP72
ATYR91
ATYR98
ALEU100
APHE141
ATRP151
ATYR170
AASP173

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 302
ChainResidue
AHOH421
AHOH424
AHOH438
BHOH414
BHOH418
BHOH440

site_idAC3
Number of Residues4
Detailsbinding site for residue CL A 303
ChainResidue
AARG152
ALYS172
AHOH428
BHOH414

site_idAC4
Number of Residues14
Detailsbinding site for residue 6P9 B 301
ChainResidue
BHIS60
BTRP62
BTRP72
BTYR91
BPHE94
BTYR98
BLEU100
BPHE141
BTRP151
BASP173
BTYR177
BTYR179
BHOH442
BHOH447

site_idAC5
Number of Residues3
Detailsbinding site for residue CL B 302
ChainResidue
AARG152
BARG152
BLYS172

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues126
DetailsRegion: {"description":"Tudor-like domain 1","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsRegion: {"description":"Histone H3K4me3 and H3R8me2a binding","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues122
DetailsRegion: {"description":"Tudor-like domain 2","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsSite: {"description":"Histone H3K4me3 and H3R8me2a binding","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by AURKA","evidences":[{"source":"PubMed","id":"22258766","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by AURKA","evidences":[{"source":"PubMed","id":"22258766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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