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5JF3

Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT018

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue SF5 A 301
ChainResidue
AGLY70
AHIS178
AZN304
AVAL71
AGLY72
AGLN77
AGLY130
AOCS131
ALEU132
AHIS174
AGLU175

site_idAC2
Number of Residues8
Detailsbinding site for residue ACT A 302
ChainResidue
AHIS145
AGLU158
AASP177
AARG187
AZN308
AHOH425
AHOH499
AHOH577

site_idAC3
Number of Residues9
Detailsbinding site for residue IMD A 303
ChainResidue
AGLU32
AARG147
AVAL148
ALYS163
ALEU164
AZN312
AHOH408
AHOH524
AHOH632

site_idAC4
Number of Residues5
Detailsbinding site for residue ZN A 304
ChainResidue
AGLN77
AOCS131
AHIS174
AHIS178
ASF5301

site_idAC5
Number of Residues5
Detailsbinding site for residue ZN A 305
ChainResidue
AHIS55
AGLU198
AHOH565
AHOH594
AHOH598

site_idAC6
Number of Residues7
Detailsbinding site for residue ZN A 306
ChainResidue
AHIS118
AASP154
AHOH410
AHOH580
AHOH600
AHOH604
AHOH606

site_idAC7
Number of Residues5
Detailsbinding site for residue ZN A 307
ChainResidue
AASP94
AGLU190
AHOH440
AHOH517
AHOH563

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN A 308
ChainResidue
AHIS145
AGLU158
AACT302
AHOH589

site_idAC9
Number of Residues6
Detailsbinding site for residue ZN A 309
ChainResidue
AHIS12
AASP18
AHOH416
AHOH417
AHOH453
AHOH570

site_idAD1
Number of Residues3
Detailsbinding site for residue ZN A 310
ChainResidue
AGLU43
AGLU47
AHOH550

site_idAD2
Number of Residues6
Detailsbinding site for residue ZN A 311
ChainResidue
AGLU102
AGLU151
AHOH567
AHOH571
AHOH595
AHOH597

site_idAD3
Number of Residues5
Detailsbinding site for residue ZN A 312
ChainResidue
AGLU32
AIMD303
AHOH408
AHOH623
AHOH634

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AGLU175

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00163
ChainResidueDetails
AOCS131
AHIS174
AHIS178

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PDB entries from 2024-04-24

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