Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JDG

Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 0.1mM Ca2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0005262molecular_functioncalcium channel activity
A0005886cellular_componentplasma membrane
A0006874biological_processintracellular calcium ion homeostasis
A0008273molecular_functioncalcium, potassium:sodium antiporter activity
A0016020cellular_componentmembrane
A0035725biological_processsodium ion transmembrane transport
A0055085biological_processtransmembrane transport
A0070588biological_processcalcium ion transmembrane transport
A0071805biological_processpotassium ion transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NA A 401
ChainResidue
AALA47
ATHR50
ASER51
AGLU213
ASER236

site_idAC2
Number of Residues5
Detailsbinding site for residue NA A 402
ChainResidue
AGLU213
ATHR50
ASER51
AGLU54
ATHR209

site_idAC3
Number of Residues6
Detailsbinding site for residue 1PE A 403
ChainResidue
ATYR17
ASER20
AMET215
ALEU218
AALA219
ALYS222

site_idAC4
Number of Residues2
Detailsbinding site for residue PEG A 404
ChainResidue
AARG140
AALA297

site_idAC5
Number of Residues5
Detailsbinding site for residue 1PE A 405
ChainResidue
ASER124
ATRP125
ASER249
AMET252
AHIS253

site_idAC6
Number of Residues1
Detailsbinding site for residue 1PE A 406
ChainResidue
AARG282

site_idAC7
Number of Residues1
Detailsbinding site for residue 1PE A 407
ChainResidue
AALA148

site_idAC8
Number of Residues7
Detailsbinding site for residue OLC A 408
ChainResidue
ASER37
AASN38
AASN224
ALEU225
AGLY226
AGLY227
AHOH512

site_idAC9
Number of Residues1
Detailsbinding site for residue OLC A 409
ChainResidue
AGLU180

site_idAD1
Number of Residues5
Detailsbinding site for residue OLC A 410
ChainResidue
AVAL117
AASP121
AASP127
AMYS417
ACA427

site_idAD2
Number of Residues2
Detailsbinding site for residue MYS A 411
ChainResidue
AGLN260
ALEU299

site_idAD3
Number of Residues5
Detailsbinding site for residue MYS A 412
ChainResidue
AILE91
ATRP125
ALEU250
AILE286
AALA290

site_idAD4
Number of Residues3
Detailsbinding site for residue MYS A 413
ChainResidue
AVAL107
APHE114
ALEU134

site_idAD5
Number of Residues3
Detailsbinding site for residue MYS A 414
ChainResidue
ALEU291
ASER298
AARG300

site_idAD6
Number of Residues3
Detailsbinding site for residue MYS A 416
ChainResidue
APHE9
APHE114
AVAL117

site_idAD7
Number of Residues2
Detailsbinding site for residue MYS A 417
ChainResidue
AASP127
AOLC410

site_idAD8
Number of Residues1
Detailsbinding site for residue MYS A 418
ChainResidue
ATYR272

site_idAD9
Number of Residues1
Detailsbinding site for residue MYS A 419
ChainResidue
AASN258

site_idAE1
Number of Residues3
Detailsbinding site for residue MYS A 420
ChainResidue
AVAL45
AILE48
AVAL143

site_idAE2
Number of Residues2
Detailsbinding site for residue MYS A 421
ChainResidue
ALEU250
AARG282

site_idAE3
Number of Residues1
Detailsbinding site for residue MYS A 423
ChainResidue
APHE274

site_idAE4
Number of Residues1
Detailsbinding site for residue MYS A 424
ChainResidue
ATYR60

site_idAE5
Number of Residues6
Detailsbinding site for residue CA A 427
ChainResidue
AILE118
AASP121
AGLY122
AASP127
AOLC410
AHOH525

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues180
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AILE3-PHE23
APHE39-ALA59
ASER77-VAL97
ALEU106-ILE126
AGLY128-ALA148
APHE163-VAL183
AVAL199-ALA219
AGLY227-VAL247
ALEU254-PHE274

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon