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5JDG

Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 0.1mM Ca2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2013-03-31
DetectorMARRESEARCH
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths49.477, 72.470, 96.297
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.155 - 2.407
R-factor0.2033
Rwork0.197
R-free0.26270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3v5u
RMSD bond length0.002
RMSD bond angle0.686
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.1140.030
Number of reflections13781
<I/σ(I)>7
Completeness [%]99.298.7100
Redundancy6.96.27.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE293PEG400

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