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5JCZ

Rab11 bound to MyoVa-GTD

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
D0003924molecular_functionGTPase activity
D0005525molecular_functionGTP binding
I0003924molecular_functionGTPase activity
I0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
ASER25
ATHR43
AGDP202
ABEF203
AHOH316
AHOH326

site_idAC2
Number of Residues23
Detailsbinding site for residue GDP A 202
ChainResidue
ALYS24
ASER25
AASN26
APHE36
AASN37
ALEU38
ASER40
AASN124
ALYS125
AASP127
ALEU128
ASER154
AALA155
ALEU156
AMG201
ABEF203
AHOH308
AHOH316
AHOH326
AHOH336
AGLY21
AVAL22
AGLY23

site_idAC3
Number of Residues11
Detailsbinding site for residue BEF A 203
ChainResidue
ASER20
ALYS24
ASER42
ATHR43
AALA68
AGLY69
AMG201
AGDP202
AHOH316
AHOH326
AHOH431

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 204
ChainResidue
AILE17
AGLY18
ATHR67
AARG72
ATRP105
AGLU108

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 205
ChainResidue
AARG129
AARG132
AHOH399
CCYS1674

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 206
ChainResidue
ATYR99
AGLU100
AVAL102
AGLU103
APHE142
AHOH357

site_idAC7
Number of Residues4
Detailsbinding site for residue ACT A 207
ChainResidue
AARG140
AILE151
AGLU152
AASN160

site_idAC8
Number of Residues2
Detailsbinding site for residue GOL A 208
ChainResidue
ATYR10
ALEU11

site_idAC9
Number of Residues8
Detailsbinding site for residue EDO B 1901
ChainResidue
BTYR1692
BGLY1695
BALA1696
BTHR1741
BLEU1742
BPRO1744
BLEU1745
BMET1817

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 1902
ChainResidue
AHOH412
BGLU1725
BGLU1726
BARG1729
BHOH2046

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL B 1903
ChainResidue
AGLU47
BARG1718
BGLU1725
BLYS1739
BGLU1743

site_idAD3
Number of Residues9
Detailsbinding site for residue EDO C 1901
ChainResidue
CTYR1692
CGLY1695
CALA1696
CTHR1741
CLEU1742
CPRO1744
CLEU1745
CMET1817
CHOH2080

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO C 1902
ChainResidue
CLEU1752
CGLN1753
CVAL1754
CLYS1756
CTYR1784
DTYR73

site_idAD5
Number of Residues3
Detailsbinding site for residue EDO C 1903
ChainResidue
CLEU1491
CLYS1540
CLYS1544

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO C 1904
ChainResidue
CTHR1826
CPRO1828
CHOH2168
CHOH2241
CGLU1681

site_idAD7
Number of Residues5
Detailsbinding site for residue MG C 1905
ChainResidue
CARG1807
CARG1809
EASN1590
EHOH2091
EHOH2096

site_idAD8
Number of Residues1
Detailsbinding site for residue ACT C 1906
ChainResidue
CGLN1840

site_idAD9
Number of Residues6
Detailsbinding site for residue MG D 201
ChainResidue
DSER25
DTHR43
DGDP202
DBEF203
DHOH309
DHOH326

site_idAE1
Number of Residues23
Detailsbinding site for residue GDP D 202
ChainResidue
DGLY21
DVAL22
DGLY23
DLYS24
DSER25
DASN26
DPHE36
DASN37
DLEU38
DSER40
DASN124
DLYS125
DASP127
DLEU128
DSER154
DALA155
DLEU156
DMG201
DBEF203
DHOH309
DHOH322
DHOH326
DHOH333

site_idAE2
Number of Residues10
Detailsbinding site for residue BEF D 203
ChainResidue
DSER20
DLYS24
DSER42
DTHR43
DALA68
DGLY69
DMG201
DGDP202
DHOH309
DHOH326

site_idAE3
Number of Residues6
Detailsbinding site for residue EDO D 204
ChainResidue
DTYR99
DGLU100
DVAL102
DGLU103
DPHE142
DHOH343

site_idAE4
Number of Residues6
Detailsbinding site for residue EDO D 205
ChainResidue
DILE17
DGLY18
DTHR67
DARG72
DTRP105
DGLU108

site_idAE5
Number of Residues9
Detailsbinding site for residue EDO E 1901
ChainResidue
ETYR1692
EGLY1695
EALA1696
ETHR1741
ELEU1742
EPRO1744
ELEU1745
EMET1817
EHOH2014

site_idAE6
Number of Residues2
Detailsbinding site for residue EDO E 1902
ChainResidue
ELYS1779
EASN1782

site_idAE7
Number of Residues6
Detailsbinding site for residue MG I 201
ChainResidue
ISER25
ITHR43
IGDP202
IBEF203
IHOH301
IHOH303

site_idAE8
Number of Residues22
Detailsbinding site for residue GDP I 202
ChainResidue
IGLY21
IVAL22
IGLY23
ILYS24
ISER25
IASN26
IASN34
IPHE36
IASN37
ILEU38
ISER40
IASN124
ILYS125
IASP127
ISER154
IALA155
ILEU156
IMG201
IBEF203
IHOH301
IHOH303
IHOH307

site_idAE9
Number of Residues9
Detailsbinding site for residue BEF I 203
ChainResidue
ISER20
ILYS24
ISER42
ITHR43
IALA68
IGLY69
IMG201
IGDP202
IHOH303

site_idAF1
Number of Residues9
Detailsbinding site for Ligand ASP I 127 bound to ASN I 34
ChainResidue
IARG33
IASN34
IGLU35
ILYS125
ISER126
IARG129
ISER154
IASP157
IGDP202

site_idAF2
Number of Residues9
Detailsbinding site for Ligand ASP I 127 bound to ASN I 34
ChainResidue
IARG33
IASN34
IGLU35
ILYS125
ISER126
IARG129
ISER154
IASP157
IGDP202

site_idAF3
Number of Residues15
Detailsbinding site for Ligand SER I 154 bound to ASN I 34
ChainResidue
IARG30
IASN34
IGLU35
IASN124
ISER126
IASP127
ITHR153
IALA155
ILEU156
IASP157
ISER158
ISER158
ITHR159
IVAL161
IGDP202

site_idAF4
Number of Residues15
Detailsbinding site for Ligand SER I 154 bound to ASN I 34
ChainResidue
IARG30
IASN34
IGLU35
IASN124
ISER126
IASP127
ITHR153
IALA155
ILEU156
IASP157
ISER158
ISER158
ITHR159
IVAL161
IGDP202

site_idAF5
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAF6
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAF7
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAF8
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAF9
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAG1
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAG2
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAG3
Number of Residues14
Detailsbinding site for Ligand GLU I 162 bound to ASN I 160
ChainResidue
IILE151
IGLU152
ITHR153
ITHR159
IASN160
IASN160
IVAL161
IVAL161
IALA163
IALA163
IALA164
IALA164
IPHE165
IGLN166

site_idAG4
Number of Residues28
Detailsbinding site for Di-peptide ARG I 30 and THR I 159
ChainResidue
IASN26
ILEU27
ILEU28
ISER29
ISER29
IPHE31
IPHE31
ITHR32
ITHR32
IASN34
IASN34
IGLU35
IPHE36
ITHR153
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
IASP157
IASP157
ISER158
ISER158
IASN160
IVAL161
IVAL161
IGLU162

site_idAG5
Number of Residues27
Detailsbinding site for Di-peptide ARG I 30 and ASP I 157
ChainResidue
IASN26
IASN26
ILEU27
ILEU28
ISER29
ISER29
IPHE31
IPHE31
ITHR32
IARG33
IASN34
IASN34
IGLU35
IGLU35
IPHE36
IPHE36
IASP127
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
ISER158
ISER158
ITHR159
ITHR159

site_idAG6
Number of Residues28
Detailsbinding site for Di-peptide ARG I 30 and THR I 159
ChainResidue
IASN26
ILEU27
ILEU28
ISER29
ISER29
IPHE31
IPHE31
ITHR32
ITHR32
IASN34
IASN34
IGLU35
IPHE36
ITHR153
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
IASP157
IASP157
ISER158
ISER158
IASN160
IVAL161
IVAL161
IGLU162

site_idAG7
Number of Residues27
Detailsbinding site for Di-peptide ARG I 30 and ASP I 157
ChainResidue
IASN26
IASN26
ILEU27
ILEU28
ISER29
ISER29
IPHE31
IPHE31
ITHR32
IARG33
IASN34
IASN34
IGLU35
IGLU35
IPHE36
IPHE36
IASP127
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
ISER158
ISER158
ITHR159
ITHR159

site_idAG8
Number of Residues21
Detailsbinding site for Di-peptide ARG I 30 and LEU I 156
ChainResidue
IASN26
ILEU27
ILEU28
ISER29
IPHE31
ITHR32
IASN34
IGLU35
IGLU35
IPHE36
IPHE36
ISER154
ISER154
IALA155
IALA155
IASP157
IASP157
ISER158
ISER158
ITHR159
IGDP202

site_idAG9
Number of Residues27
Detailsbinding site for Di-peptide ARG I 30 and ASP I 157
ChainResidue
IASN26
IASN26
ILEU27
ILEU28
ISER29
ISER29
IPHE31
IPHE31
ITHR32
IARG33
IASN34
IASN34
IGLU35
IGLU35
IPHE36
IPHE36
IASP127
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
ISER158
ISER158
ITHR159
ITHR159

site_idAH1
Number of Residues21
Detailsbinding site for Di-peptide PHE I 31 and THR I 159
ChainResidue
ILEU27
ILEU28
ISER29
ISER29
IARG30
IARG30
ITHR32
ITHR32
IARG33
IASN34
ITHR153
ISER154
IASP157
IASP157
ISER158
IASN160
IASN160
IVAL161
IVAL161
IGLU162
IPHE165

site_idAH2
Number of Residues21
Detailsbinding site for Di-peptide PHE I 31 and THR I 159
ChainResidue
ILEU27
ILEU28
ISER29
ISER29
IARG30
IARG30
ITHR32
ITHR32
IARG33
IASN34
ITHR153
ISER154
IASP157
IASP157
ISER158
IASN160
IASN160
IVAL161
IVAL161
IGLU162
IPHE165

site_idAH3
Number of Residues22
Detailsbinding site for Di-peptide GLU I 35 and ASP I 157
ChainResidue
IASN26
ISER29
ISER29
IARG30
IARG30
IPHE31
IARG33
IARG33
IASN34
IASN34
IPHE36
IPHE36
IASP127
IASP127
ISER154
ISER154
IALA155
IALA155
ILEU156
ILEU156
ISER158
ITHR159

Functional Information from PROSITE/UniProt
site_idPS00675
Number of Residues14
DetailsSIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. VVLiGDSGVGKsnL
ChainResidueDetails
AVAL14-LEU27

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231
ChainResidueDetails
BTYR1477
CTYR1477
ETYR1477
DGLY18
DASN124
DSER154
IGLY18
IASN124
ISER154

site_idSWS_FT_FI2
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
BGLY1677
CGLY1677
EGLY1677

site_idSWS_FT_FI3
Number of Residues3
DetailsMOD_RES: Phosphothreonine => ECO:0000255
ChainResidueDetails
BTHR1785
CTHR1785
ETHR1785

site_idSWS_FT_FI4
Number of Residues3
DetailsMOD_RES: N-acetylglycine => ECO:0000269|Ref.11
ChainResidueDetails
AGLY2
DGLY2
IGLY2

site_idSWS_FT_FI5
Number of Residues3
DetailsCARBOHYD: (Microbial infection) N-beta-linked (GlcNAc) arginine => ECO:0000269|PubMed:32974215
ChainResidueDetails
AARG4
DARG4
IARG4

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PDB entries from 2024-07-24

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