Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5J5P

AMP-PNP-stabilized ATPase domain of topoisomerase IV from Streptococcus pneumoniae, complex type I

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A0005524molecular_functionATP binding
A0006265biological_processDNA topological change
B0003677molecular_functionDNA binding
B0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
B0005524molecular_functionATP binding
B0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues31
Detailsbinding site for residue ANP A 501
ChainResidue
AGLU47
ALYS107
ATYR113
AGLY118
ALEU119
AHIS120
AGLY121
AVAL122
AGLY123
ASER124
ATHR172
AASN51
ALYS344
ANA502
AMG503
AHOH602
AHOH642
AHOH650
AHOH706
AHOH777
AHOH818
AHOH832
AGLU55
BTYR11
BILE16
AASP78
AMET83
AILE98
AALA104
AGLY105
AGLY106

site_idAC2
Number of Residues6
Detailsbinding site for residue NA A 502
ChainResidue
AILE98
AILE101
AALA104
AGLY121
ASER125
AANP501

site_idAC3
Number of Residues4
Detailsbinding site for residue MG A 503
ChainResidue
AASN51
AANP501
AHOH650
AHOH818

site_idAC4
Number of Residues4
Detailsbinding site for residue MG A 504
ChainResidue
ALYS281
AASP345
AHOH736
AHOH892

site_idAC5
Number of Residues31
Detailsbinding site for residue ANP B 501
ChainResidue
ATYR11
AILE16
BGLU47
BASN51
BGLU55
BASP78
BMET83
BILE98
BALA104
BGLY105
BGLY106
BLYS107
BTYR113
BGLY118
BLEU119
BHIS120
BGLY121
BVAL122
BGLY123
BSER124
BTHR172
BLYS344
BNA502
BMG503
BHOH605
BHOH641
BHOH658
BHOH711
BHOH813
BHOH818
BHOH838

site_idAC6
Number of Residues6
Detailsbinding site for residue NA B 502
ChainResidue
BILE98
BILE101
BALA104
BGLY121
BSER125
BANP501

site_idAC7
Number of Residues4
Detailsbinding site for residue MG B 503
ChainResidue
BASN51
BANP501
BHOH641
BHOH813

site_idAC8
Number of Residues4
Detailsbinding site for residue MG B 504
ChainResidue
BASP345
BHOH635
BHOH788
BHOH947

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00939
ChainResidueDetails
ATYR11
BLYS344
AASN51
AASP78
AGLY118
ALYS344
BTYR11
BASN51
BASP78
BGLY118

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon