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5J01

Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+.

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AC358
AG359
AC377
AU419
AHOH622

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
AHOH673
AHOH752
AU4
AHOH645
AHOH656
AHOH666

site_idAC3
Number of Residues7
Detailsbinding site for residue MG A 503
ChainResidue
AG3
AU4
AG5
AA376
AHOH615
AHOH641
AHOH725

site_idAC4
Number of Residues5
Detailsbinding site for residue MG A 504
ChainResidue
AHOH689
AHOH700
AHOH738
AHOH749
AHOH751

site_idAC5
Number of Residues6
Detailsbinding site for residue MG A 505
ChainResidue
AA355
AA356
AHOH647
AHOH680
AHOH708
AHOH711

site_idAC6
Number of Residues7
Detailsbinding site for residue MG A 506
ChainResidue
AU71
AC367
AC368
AHOH667
AHOH687
AHOH688
AHOH710

site_idAC7
Number of Residues5
Detailsbinding site for residue MG A 507
ChainResidue
AHOH604
AHOH619
AHOH665
AHOH697
AHOH702

site_idAC8
Number of Residues6
Detailsbinding site for residue MG A 508
ChainResidue
AA106
AG107
AHOH626
AHOH644
AHOH653
AHOH664

site_idAC9
Number of Residues5
Detailsbinding site for residue MG A 509
ChainResidue
AG104
AA105
AA106
AHOH603
AHOH670

site_idAD1
Number of Residues6
Detailsbinding site for residue MG A 510
ChainResidue
AG111
AHOH614
AHOH635
AHOH660
AHOH712
AHOH743

site_idAD2
Number of Residues7
Detailsbinding site for residue MG A 511
ChainResidue
AG136
AU225
AHOH624
AHOH636
AHOH638
AHOH642
AHOH681

site_idAD3
Number of Residues4
Detailsbinding site for residue MG A 512
ChainResidue
AG142
AHOH646
AHOH655
AHOH731

site_idAD4
Number of Residues6
Detailsbinding site for residue MG A 513
ChainResidue
AG142
AC145
AHOH606
AHOH607
AHOH661
AHOH676

site_idAD5
Number of Residues6
Detailsbinding site for residue MG A 514
ChainResidue
AC262
AHOH621
AHOH625
AHOH686
AHOH709
AHOH757

site_idAD6
Number of Residues4
Detailsbinding site for residue MG A 515
ChainResidue
AG294
AHOH613
AHOH649
AHOH730

site_idAD7
Number of Residues7
Detailsbinding site for residue MG A 516
ChainResidue
AU59
AHOH602
AHOH616
AHOH629
AHOH674
AHOH740
AHOH748

site_idAD8
Number of Residues6
Detailsbinding site for residue MG A 517
ChainResidue
AC6
AC7
AHOH608
AHOH717
AHOH719
AHOH722

site_idAD9
Number of Residues6
Detailsbinding site for residue MG A 518
ChainResidue
AA67
AHOH610
AHOH683
AHOH685
AHOH694
AU66

site_idAE1
Number of Residues5
Detailsbinding site for residue MG A 519
ChainResidue
AA154
AG155
AHOH618
AHOH628
AHOH659

site_idAE2
Number of Residues6
Detailsbinding site for residue MG A 520
ChainResidue
AG28
AHOH617
AHOH620
AHOH630
AHOH713
AHOH755

site_idAE3
Number of Residues5
Detailsbinding site for residue MG A 521
ChainResidue
AA318
AHOH605
AHOH714
AHOH735
AHOH753

site_idAE4
Number of Residues6
Detailsbinding site for residue MG A 522
ChainResidue
AHOH609
AHOH648
AHOH691
AHOH721
AHOH754
AHOH758

site_idAE5
Number of Residues6
Detailsbinding site for residue MG A 523
ChainResidue
AA73
AC74
AHOH611
AHOH662
AHOH682
AHOH701

site_idAE6
Number of Residues5
Detailsbinding site for residue MG A 524
ChainResidue
AU285
AHOH663
AHOH668
AHOH677
AHOH706

site_idAE7
Number of Residues5
Detailsbinding site for residue MG A 525
ChainResidue
AA67
AG68
AHOH632
AHOH651
AHOH652

site_idAE8
Number of Residues5
Detailsbinding site for residue MG A 526
ChainResidue
AC119
AG173
AA174
AG239
AHOH679

site_idAE9
Number of Residues5
Detailsbinding site for residue MG A 527
ChainResidue
AHOH728
AHOH729
AHOH737
AHOH741
AHOH744

site_idAF1
Number of Residues4
Detailsbinding site for residue MG A 528
ChainResidue
AA283
AHOH650
AHOH704
AHOH736

site_idAF2
Number of Residues6
Detailsbinding site for residue MG A 529
ChainResidue
AU258
AHOH637
AHOH715
AHOH718
AHOH720
AHOH747

site_idAF3
Number of Residues5
Detailsbinding site for residue MG A 530
ChainResidue
AG90
AG92
AHOH732
AHOH733
AHOH759

site_idAF4
Number of Residues5
Detailsbinding site for residue MG A 531
ChainResidue
AG275
AHOH658
AHOH671
AHOH693
AHOH756

site_idAF5
Number of Residues4
Detailsbinding site for residue MG A 532
ChainResidue
AHOH627
AHOH633
AHOH750
AHOH760

site_idAF6
Number of Residues5
Detailsbinding site for residue MG A 533
ChainResidue
AA183
AA184
AHOH692
AHOH696
AHOH699

site_idAF7
Number of Residues6
Detailsbinding site for residue MG A 534
ChainResidue
AHOH684
AHOH726
AHOH761
AHOH763
AHOH764
AHOH765

site_idAF8
Number of Residues4
Detailsbinding site for residue MG A 535
ChainResidue
AHOH639
AHOH716
AHOH723
AHOH739

site_idAF9
Number of Residues6
Detailsbinding site for residue MG A 536
ChainResidue
AA297
AHOH640
AHOH654
AHOH724
AHOH734
AHOH762

site_idAG1
Number of Residues6
Detailsbinding site for residue MG A 537
ChainResidue
AA333
AU334
AG335
AHOH631
AHOH675
AHOH698

site_idAG2
Number of Residues3
Detailsbinding site for residue MG A 538
ChainResidue
AU96
AG97
AHOH657

site_idAG3
Number of Residues4
Detailsbinding site for residue MG A 539
ChainResidue
AC82
AG84
AHOH612
AHOH745

site_idAG4
Number of Residues3
Detailsbinding site for residue MG A 540
ChainResidue
AA223
AA224
AHOH672

site_idAG5
Number of Residues5
Detailsbinding site for residue MG A 541
ChainResidue
AA137
AA151
AA224
AHOH695
AHOH703

site_idAG6
Number of Residues5
Detailsbinding site for residue MG A 542
ChainResidue
AU26
AU65
AHOH623
AHOH727
AHOH746

site_idAG7
Number of Residues3
Detailsbinding site for residue NH4 A 543
ChainResidue
AA283
AG284
AHOH650

site_idAG8
Number of Residues3
Detailsbinding site for residue NH4 A 544
ChainResidue
AC145
AU146
AHOH707

site_idAG9
Number of Residues3
Detailsbinding site for residue NH4 A 545
ChainResidue
AC86
AG87
AHOH705

221051

PDB entries from 2024-06-12

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