5IXM

The LPS Transporter LptDE from Yersinia pestis, core complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019867	cellular_component	outer membrane
A	0061024	biological_process	membrane organization
B	0001530	molecular_function	lipopolysaccharide binding
B	0009279	cellular_component	cell outer membrane
B	0015920	biological_process	lipopolysaccharide transport
B	0019867	cellular_component	outer membrane
B	0043165	biological_process	Gram-negative-bacterium-type cell outer membrane assembly
B	1990351	cellular_component	transporter complex
C	0019867	cellular_component	outer membrane
C	0061024	biological_process	membrane organization
D	0001530	molecular_function	lipopolysaccharide binding
D	0009279	cellular_component	cell outer membrane
D	0015920	biological_process	lipopolysaccharide transport
D	0019867	cellular_component	outer membrane
D	0043165	biological_process	Gram-negative-bacterium-type cell outer membrane assembly
D	1990351	cellular_component	transporter complex
E	0019867	cellular_component	outer membrane
E	0061024	biological_process	membrane organization
F	0001530	molecular_function	lipopolysaccharide binding
F	0009279	cellular_component	cell outer membrane
F	0015920	biological_process	lipopolysaccharide transport
F	0019867	cellular_component	outer membrane
F	0043165	biological_process	Gram-negative-bacterium-type cell outer membrane assembly
F	1990351	cellular_component	transporter complex
G	0019867	cellular_component	outer membrane
G	0061024	biological_process	membrane organization
H	0001530	molecular_function	lipopolysaccharide binding
H	0009279	cellular_component	cell outer membrane
H	0015920	biological_process	lipopolysaccharide transport
H	0019867	cellular_component	outer membrane
H	0043165	biological_process	Gram-negative-bacterium-type cell outer membrane assembly
H	1990351	cellular_component	transporter complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	9
Details	binding site for residue C8E A 601

Chain	Residue
A	PHE181
A	LEU213
C	GLY384
C	THR386
C	GLY398
C	GLY399
C	TYR402
C	ALA414
C	C8E609

---

site_id	AC2
Number of Residues	6
Details	binding site for residue C8E A 602

Chain	Residue
A	PHE279
A	ARG349
A	ILE390
A	ASN391
A	ASP392
C	TYR291

---

site_id	AC3
Number of Residues	9
Details	binding site for residue C8E A 603

Chain	Residue
A	GLY265
A	VAL333
A	TYR358
A	PHE360
C	ARG424
C	ILE426
C	LEU428
C	TRP463
C	C8E606

---

site_id	AC4
Number of Residues	7
Details	binding site for residue C8E A 604

Chain	Residue
A	GLY399
A	LEU409
A	ASN413
C	PHE181
C	LEU213
C	LEU215
C	ALA226

---

site_id	AC5
Number of Residues	6
Details	binding site for residue C8E A 605

Chain	Residue
A	TYR289
A	ASN331
A	PHE360
A	HOH771
A	HOH788
C	TYR418

---

site_id	AC6
Number of Residues	9
Details	binding site for residue C8E C 601

Chain	Residue
A	TYR430
A	LYS480
C	LEU215
C	SER216
C	ASN217
C	VAL267
C	PRO285
C	C8E605
C	C8E607

---

site_id	AC7
Number of Residues	7
Details	binding site for residue C8E C 602

Chain	Residue
A	PRO209
A	PRO293
C	PHE279
C	ARG349
C	TRP388
C	ILE390
C	HOH790

---

site_id	AC8
Number of Residues	4
Details	binding site for residue C8E C 603

Chain	Residue
A	MET416
A	TYR418
C	PHE360
C	SER361

---

site_id	AC9
Number of Residues	7
Details	binding site for residue C8E C 604

Chain	Residue
C	LEU54
C	PRO56
C	HIS91
C	PHE101
C	ILE103
C	HOH762
C	HOH775

---

site_id	AD1
Number of Residues	4
Details	binding site for residue C8E C 605

Chain	Residue
A	TYR475
C	PHE269
C	C8E601
D	ARG5

---

site_id	AD2
Number of Residues	9
Details	binding site for residue C8E C 606

Chain	Residue
A	SER216
A	GLY265
A	LYS266
A	C8E603
C	TYR430
C	SER455
C	THR479
C	LYS480
C	C8E609

---

site_id	AD3
Number of Residues	7
Details	binding site for residue C8E C 607

Chain	Residue
A	ILE426
A	LEU428
C	GLY265
C	VAL333
C	TYR358
C	PHE360
C	C8E601

---

site_id	AD4
Number of Residues	5
Details	binding site for residue C8E C 608

Chain	Residue
A	SER379
A	TRP382
A	GLY384
A	TYR402
C	PHE181

---

site_id	AD5
Number of Residues	8
Details	binding site for residue C8E C 609

Chain	Residue
A	LEU215
A	C8E601
C	GLY399
C	LEU409
C	ASN413
C	TYR430
C	TYR432
C	C8E606

---

site_id	AD6
Number of Residues	7
Details	binding site for residue C8E E 601

Chain	Residue
G	GLY398
G	GLY399
G	LEU409
G	GLY412
G	ASN413
E	PHE181
E	LEU215

---

site_id	AD7
Number of Residues	6
Details	binding site for residue C8E E 602

Chain	Residue
E	ALA287
E	TYR289
E	ASN331
E	PHE360
G	TYR418
G	ILE426

---

site_id	AD8
Number of Residues	10
Details	binding site for residue C8E E 603

Chain	Residue
E	LEU396
E	GLY399
E	LEU409
E	ASN413
E	ALA414
E	TYR430
E	HOH747
G	PHE181
G	LEU213
G	C8E602

---

site_id	AD9
Number of Residues	4
Details	binding site for residue C8E E 604

Chain	Residue
E	ARG349
E	TRP388
G	PRO259
G	PRO293

---

site_id	AE1
Number of Residues	7
Details	binding site for residue C8E G 601

Chain	Residue
E	VAL211
E	PRO259
E	TYR291
G	PHE279
G	ARG349
G	TRP388
G	ASP392

---

site_id	AE2
Number of Residues	10
Details	binding site for residue C8E G 602

Chain	Residue
E	TYR430
E	SER455
E	THR479
E	LYS480
E	C8E603
G	LEU215
G	SER216
G	ASN217
G	SER221
G	ILE222

---

site_id	AE3
Number of Residues	3
Details	binding site for residue C8E G 603

Chain	Residue
E	TYR418
G	TYR289
G	PHE360

---

Functional Information from PROSITE/UniProt

site_id	PS00435
Number of Residues	11
Details	PEROXIDASE_1 Peroxidases proximal heme-ligand signature. ELRGLSGGHSL

Chain	Residue	Details
A	GLU529-LEU539

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