Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IWG

HDAC2 WITH LIGAND BRD4884

Functional Information from GO Data
ChainGOidnamespacecontents
A0004407molecular_functionhistone deacetylase activity
B0004407molecular_functionhistone deacetylase activity
C0004407molecular_functionhistone deacetylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
AASP181
AHIS183
AASP269
AIWX403

site_idAC2
Number of Residues5
Detailsbinding site for residue CA A 402
ChainResidue
AASP179
AASP181
AHIS183
ASER202
APHE203

site_idAC3
Number of Residues20
Detailsbinding site for residue IWX A 403
ChainResidue
ATYR29
AMET35
AARG39
APHE114
AGLY143
ALEU144
AHIS145
AHIS146
AGLY154
APHE155
ACYS156
AASP181
AHIS183
AASP269
ALEU276
AGLY305
AGLY306
ATYR308
AZN401
AHOH606

site_idAC4
Number of Residues6
Detailsbinding site for residue CA A 404
ChainResidue
APHE192
ATHR195
AVAL198
ATYR227
AHOH562
AHOH583

site_idAC5
Number of Residues3
Detailsbinding site for residue PG5 A 405
ChainResidue
AARG311
AGLY343
AHOH630

site_idAC6
Number of Residues3
Detailsbinding site for residue PGE A 406
ChainResidue
AASN26
ATYR27
AGLY110

site_idAC7
Number of Residues2
Detailsbinding site for residue PGE A 407
ChainResidue
ALYS71
AALA191

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BASP181
BHIS183
BASP269
BIWX403

site_idAC9
Number of Residues5
Detailsbinding site for residue CA B 402
ChainResidue
BASP179
BASP181
BHIS183
BSER202
BPHE203

site_idAD1
Number of Residues20
Detailsbinding site for residue IWX B 403
ChainResidue
BTYR29
BMET35
BARG39
BPHE114
BGLY143
BLEU144
BHIS145
BHIS146
BGLY154
BPHE155
BCYS156
BASP181
BHIS183
BPHE210
BASP269
BGLY305
BGLY306
BTYR308
BZN401
BHOH602

site_idAD2
Number of Residues6
Detailsbinding site for residue CA B 404
ChainResidue
BPHE192
BTHR195
BVAL198
BTYR227
BHOH585
BHOH590

site_idAD3
Number of Residues6
Detailsbinding site for residue PEG B 405
ChainResidue
BLYS284
BHIS349
BHOH512
BHOH513
CGLU67
CTHR70

site_idAD4
Number of Residues3
Detailsbinding site for residue PEG B 406
ChainResidue
BASN26
BTYR27
BASP109

site_idAD5
Number of Residues2
Detailsbinding site for residue PEG B 407
ChainResidue
BGLU340
BGLY343

site_idAD6
Number of Residues5
Detailsbinding site for residue PG4 B 408
ChainResidue
BASN354
CLEU169
CTYR171
CGLN173
CARG197

site_idAD7
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CASP181
CHIS183
CASP269
CIWX403

site_idAD8
Number of Residues5
Detailsbinding site for residue CA C 402
ChainResidue
CASP181
CHIS183
CSER202
CPHE203
CASP179

site_idAD9
Number of Residues22
Detailsbinding site for residue IWX C 403
ChainResidue
CTYR29
CMET35
CARG39
CPHE114
CGLY143
CLEU144
CHIS145
CHIS146
CGLY154
CPHE155
CCYS156
CASP181
CHIS183
CPHE210
CASP269
CLEU276
CGLY305
CGLY306
CTYR308
CZN401
CHOH516
CHOH617

site_idAE1
Number of Residues6
Detailsbinding site for residue CA C 404
ChainResidue
CPHE192
CTHR195
CVAL198
CTYR227
CHOH555
CHOH570

site_idAE2
Number of Residues3
Detailsbinding site for residue PEG C 405
ChainResidue
CASP23
CASN26
CTYR27

site_idAE3
Number of Residues3
Detailsbinding site for residue PEG C 406
ChainResidue
BPRO344
CHOH564
CHOH646

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: ACT_SITE => ECO:0000250|UniProtKB:Q13547
ChainResidueDetails
AHIS146
BHIS146
CHIS146

site_idSWS_FT_FI2
Number of Residues27
DetailsBINDING: BINDING => ECO:0000269|PubMed:37137925, ECO:0007744|PDB:8BPA, ECO:0007744|PDB:8BPB, ECO:0007744|PDB:8BPC
ChainResidueDetails
AASP179
BASP179
BASP181
BHIS183
BPHE192
BTHR195
BVAL198
BSER202
BPHE203
BASP269
CASP179
AASP181
CASP181
CHIS183
CPHE192
CTHR195
CVAL198
CSER202
CPHE203
CASP269
AHIS183
APHE192
ATHR195
AVAL198
ASER202
APHE203
AASP269

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:37137925, ECO:0007744|PDB:8BPB, ECO:0007744|PDB:8BPC
ChainResidueDetails
ATYR227
BTYR227
CTYR227

site_idSWS_FT_FI4
Number of Residues3
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:Q13547
ChainResidueDetails
ALYS79
BLYS79
CLYS79

site_idSWS_FT_FI5
Number of Residues3
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q13547
ChainResidueDetails
ALYS225
BLYS225
CLYS225

site_idSWS_FT_FI6
Number of Residues6
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:P70288
ChainResidueDetails
ACYS266
ACYS278
BCYS266
BCYS278
CCYS266
CCYS278

site_idSWS_FT_FI7
Number of Residues6
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS79
BLYS79
CLYS79

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon