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5IVY

Linked KDM5A Jmj Domain Bound to the Inhibitor N16 [3-(2-(4-chlorophenyl)acetamido)isonicotinic acid]

Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue 6EO A 601
ChainResidue
ALYS45
ATRP503
AHIS571
AMN602
AHOH712
AHOH832
AHOH860
AARG73
ATYR409
AASP412
ATYR472
ASER479
APHE480
AHIS483
ALYS501

site_idAC2
Number of Residues6
Detailsbinding site for residue MN A 602
ChainResidue
AHIS483
AGLU485
AHIS571
A6EO601
AHOH755
AHOH832

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues50
DetailsZN_FING: PHD-type 1 => ECO:0000255|PROSITE-ProRule:PRU00146
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:26645689, ECO:0000269|PubMed:27427228
ChainResidueDetails
ATYR409
ASER491
AASN493
ALYS501

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000305|PubMed:26645689, ECO:0000305|PubMed:27214401, ECO:0000305|PubMed:27427228, ECO:0000305|PubMed:27499454
ChainResidueDetails
AHIS483
AHIS571

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:26645689, ECO:0000305|PubMed:27214401, ECO:0000305|PubMed:27427228, ECO:0000305|PubMed:27499454
ChainResidueDetails
AGLU485

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER464

site_idSWS_FT_FI6
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALEU451

237423

PDB entries from 2025-06-11

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