5IRM
Crystal structure of rabbit NOD2 in an ADP-bound state (Crystal form2)
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | binding site for residue ADP A 1101 |
| Chain | Residue |
| A | THR219 |
| A | TYR435 |
| A | PRO466 |
| A | VAL467 |
| A | HIS583 |
| A | TYR232 |
| A | THR233 |
| A | GLY282 |
| A | SER283 |
| A | GLY284 |
| A | LYS285 |
| A | SER286 |
| A | THR287 |
| site_id | AC2 |
| Number of Residues | 12 |
| Details | binding site for residue ADP C 1101 |
| Chain | Residue |
| C | TYR232 |
| C | THR233 |
| C | GLY282 |
| C | SER283 |
| C | GLY284 |
| C | LYS285 |
| C | SER286 |
| C | THR287 |
| C | TYR435 |
| C | PRO466 |
| C | VAL467 |
| C | HIS583 |
Functional Information from PROSITE/UniProt
| site_id | PS00430 |
| Number of Residues | 90 |
| Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. gpefeaaackkymsklrtivaaqsrflstydgaenlclediytentlevrtevgmagplhkspaalgleelfspnghlneda.................................DTVLVVGE |
| Chain | Residue | Details |
| A | GLY191-GLU280 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:27283905, ECO:0007744|PDB:5IRM |
| Chain | Residue | Details |
| A | ALA212 | |
| C | ALA212 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 16 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:27283905, ECO:0007744|PDB:5IRL, ECO:0007744|PDB:5IRM, ECO:0007744|PDB:5IRN |
| Chain | Residue | Details |
| A | ASN225 | |
| C | LEU226 | |
| C | VAL275 | |
| C | VAL277 | |
| C | VAL278 | |
| C | GLY279 | |
| C | GLU280 | |
| C | THR576 | |
| A | LEU226 | |
| A | VAL275 | |
| A | VAL277 | |
| A | VAL278 | |
| A | GLY279 | |
| A | GLU280 | |
| A | THR576 | |
| C | ASN225 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00136 |
| Chain | Residue | Details |
| A | ALA272 | |
| C | ALA272 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:27283905, ECO:0007744|PDB:5IRN |
| Chain | Residue | Details |
| A | LEU276 | |
| C | LEU276 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | LIPID: S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q9HC29 |
| Chain | Residue | Details |
| A | PHE368 | |
| C | PHE368 |
