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5IM3

Crystal structure of the class I ribonucleotide reductase from Pseudomonas aeruginosa in complex with dATP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
A0005524molecular_functionATP binding
A0005971cellular_componentribonucleoside-diphosphate reductase complex
A0009263biological_processdeoxyribonucleotide biosynthetic process
A0016491molecular_functionoxidoreductase activity
B0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
B0005524molecular_functionATP binding
B0005971cellular_componentribonucleoside-diphosphate reductase complex
B0009263biological_processdeoxyribonucleotide biosynthetic process
B0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue DTP A 1001
ChainResidue
AVAL34
AILE101
AGLN102
ATYR121
ADTP1002
AMG1003
ALYS36
AARG37
APRO43
ATYR44
ATHR45
ALYS48
AILE49
AILE98

site_idAC2
Number of Residues12
Detailsbinding site for residue DTP A 1002
ChainResidue
AARG37
AALA52
ALYS55
AALA59
AGLN102
AASP120
ATYR121
ATYR124
AARG128
AARG132
ADTP1001
AMG1003

site_idAC3
Number of Residues3
Detailsbinding site for residue MG A 1003
ChainResidue
AARG37
ADTP1001
ADTP1002

site_idAC4
Number of Residues13
Detailsbinding site for residue DTP A 1004
ChainResidue
ALYS397
AALA439
AVAL440
AHOH1135
BASP380
BASP381
BLEU382
BILE385
BVAL409
BARG410
BILE416
BLYS417
BHOH1118

site_idAC5
Number of Residues11
Detailsbinding site for residue DTP A 1005
ChainResidue
AASP380
AASP381
ALEU382
AILE385
AARG410
AILE416
AHOH1151
BLYS397
BALA439
BVAL440
BLYS886

site_idAC6
Number of Residues16
Detailsbinding site for residue DTP B 1001
ChainResidue
BLYS36
BARG37
BVAL42
BPRO43
BTYR44
BTHR45
BLYS48
BILE49
BILE98
BILE101
BGLN102
BVAL105
BTYR121
BDTP1002
BMG1003
BHOH1111

site_idAC7
Number of Residues13
Detailsbinding site for residue DTP B 1002
ChainResidue
BARG37
BALA52
BALA56
BALA59
BGLN102
BASP120
BTYR121
BTYR124
BARG128
BARG132
BDTP1001
BMG1003
BHOH1109

site_idAC8
Number of Residues2
Detailsbinding site for residue MG B 1003
ChainResidue
BDTP1001
BDTP1002

Functional Information from PROSITE/UniProt
site_idPS00089
Number of Residues22
DetailsRIBORED_LARGE Ribonucleotide reductase large subunit signature. WapLrervqk.GIRNsniMAiaP
ChainResidueDetails
ATRP750-PRO771

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PDB entries from 2024-07-24

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