Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006281 | biological_process | DNA repair |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0034061 | molecular_function | DNA polymerase activity |
E | 0003677 | molecular_function | DNA binding |
E | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
E | 0006281 | biological_process | DNA repair |
E | 0016779 | molecular_function | nucleotidyltransferase activity |
E | 0034061 | molecular_function | DNA polymerase activity |
I | 0003677 | molecular_function | DNA binding |
I | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
I | 0006281 | biological_process | DNA repair |
I | 0016779 | molecular_function | nucleotidyltransferase activity |
I | 0034061 | molecular_function | DNA polymerase activity |
M | 0003677 | molecular_function | DNA binding |
M | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
M | 0006281 | biological_process | DNA repair |
M | 0016779 | molecular_function | nucleotidyltransferase activity |
M | 0034061 | molecular_function | DNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue NA A 601 |
Chain | Residue |
A | SER339 |
A | ILE341 |
A | ALA344 |
C | DA5 |
C | HOH107 |
C | HOH115 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue NA A 602 |
Chain | Residue |
A | HOH931 |
D | DC3 |
M | LYS307 |
A | CYS300 |
A | ILE302 |
A | ILE305 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue NA E 601 |
Chain | Residue |
E | SER339 |
E | ILE341 |
E | ALA344 |
G | DA5 |
G | HOH101 |
G | HOH107 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue NA I 601 |
Chain | Residue |
I | SER339 |
I | ILE341 |
I | ALA344 |
K | DA5 |
K | HOH110 |
K | HOH113 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue NA M 601 |
Chain | Residue |
M | SER339 |
M | ILE341 |
M | ALA344 |
M | HOH962 |
O | DA5 |
O | HOH108 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue NA M 602 |
Chain | Residue |
M | CYS300 |
M | ILE302 |
M | ILE305 |
M | HOH948 |
P | DC3 |
P | HOH110 |
site_id | AC7 |
Number of Residues | 13 |
Details | binding site for Di-peptide CYS A 543 and CYS M 543 |
Chain | Residue |
A | VAL537 |
A | ARG538 |
A | ASN539 |
A | HIS541 |
A | GLY542 |
A | LYS544 |
A | VAL545 |
M | VAL537 |
M | ARG538 |
M | ASN539 |
M | GLY542 |
M | LYS544 |
M | VAL545 |
site_id | AC8 |
Number of Residues | 13 |
Details | binding site for Di-peptide CYS A 543 and CYS M 543 |
Chain | Residue |
A | VAL537 |
A | ARG538 |
A | ASN539 |
A | HIS541 |
A | GLY542 |
A | LYS544 |
A | VAL545 |
M | VAL537 |
M | ARG538 |
M | ASN539 |
M | GLY542 |
M | LYS544 |
M | VAL545 |
site_id | AC9 |
Number of Residues | 14 |
Details | binding site for Di-nucleotide DC J 4 and 8OG J 5 |
Chain | Residue |
I | TRP274 |
I | LEU277 |
I | TYR505 |
I | ARG514 |
I | ARG517 |
I | LYS521 |
I | HOH705 |
I | HOH756 |
J | DG3 |
J | DG6 |
J | HOH108 |
J | HOH109 |
J | HOH115 |
L | DG1 |
site_id | AD1 |
Number of Residues | 12 |
Details | binding site for Di-nucleotide 8OG J 5 and DG J 6 |
Chain | Residue |
I | TYR505 |
I | ARG514 |
I | ARG517 |
I | HOH705 |
I | HOH756 |
J | DC4 |
J | DT7 |
J | HOH112 |
J | HOH115 |
J | HOH118 |
K | DA5 |
K | DC6 |
site_id | AD2 |
Number of Residues | 17 |
Details | binding site for Di-nucleotide DC N 4 and 8OG N 5 |
Chain | Residue |
N | HOH107 |
N | HOH108 |
N | HOH117 |
N | HOH121 |
N | HOH123 |
P | DG1 |
M | TRP274 |
M | LEU277 |
M | TYR505 |
M | ARG514 |
M | ARG517 |
M | LYS521 |
M | HOH741 |
N | DG3 |
N | DG6 |
N | HOH101 |
N | HOH103 |
site_id | AD3 |
Number of Residues | 17 |
Details | binding site for Di-nucleotide 8OG N 5 and DG N 6 |
Chain | Residue |
M | TYR505 |
M | ARG514 |
M | ARG517 |
M | HOH741 |
M | HOH883 |
N | DC4 |
N | DT7 |
N | HOH101 |
N | HOH103 |
N | HOH107 |
N | HOH114 |
N | HOH115 |
N | HOH121 |
N | HOH123 |
N | HOH127 |
O | DA5 |
O | DC6 |
Functional Information from PROSITE/UniProt
site_id | PS00522 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_X DNA polymerase family X signature. GSYrRGkatCgDVDVLIthP |
Chain | Residue | Details |
A | GLY416-PRO435 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
E | LYS312 | |
I | LYS312 | |
M | LYS312 | |
A | LYS312 | |
Chain | Residue | Details |
E | ARG386 | |
E | SER417 | |
E | GLY426 | |
E | ASN513 | |
I | ARG386 | |
I | SER417 | |
I | GLY426 | |
I | ASN513 | |
M | ARG386 | |
M | SER417 | |
M | GLY426 | |
M | ASN513 | |
A | ARG386 | |
A | SER417 | |
A | GLY426 | |
A | ASN513 | |
Chain | Residue | Details |
A | ASP427 | |
A | ASP429 | |
A | ASP490 | |
E | ASP427 | |
E | ASP429 | |
E | ASP490 | |
I | ASP427 | |
I | ASP429 | |
I | ASP490 | |
M | ASP427 | |
M | ASP429 | |
M | ASP490 | |