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5HRE

The crystal structure of AsfvPolX:DNA3 binary complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006281biological_processDNA repair
A0006303biological_processdouble-strand break repair via nonhomologous end joining
A0006974biological_processDNA damage response
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0044423cellular_componentvirion component
A0046872molecular_functionmetal ion binding
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 201
ChainResidue
AASP49
AASP51
AFMT202
AHOH306
AHOH320
BDT9

site_idAC2
Number of Residues8
Detailsbinding site for residue FMT A 202
ChainResidue
AASP51
AMN201
AHOH306
AHOH345
BDT9
AGLY38
ASER39
AARG42

site_idAC3
Number of Residues2
Detailsbinding site for residue PO4 A 203
ChainResidue
AARG41
AHOH307

site_idAC4
Number of Residues4
Detailsbinding site for residue PO4 A 204
ChainResidue
AILE113
ATHR155
AGLU156
AHOH381

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GSLrREekmLnDVDLLIivP
ChainResidueDetails
AGLY38-PRO57

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI3
Number of Residues9
DetailsRegion: {"description":"Involved in ssDNA binding","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11685239","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28245220","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsSite: {"description":"Stabilizes dGTP in a syn conformation to overcome the Watson-Crick base pairing constraint","evidences":[{"source":"PubMed","id":"24617852","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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