Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5GQR

Crystal structure of PXY-CLE41-SERK2

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	48
Details	Repeat: {"description":"LRR 1","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI2
Number of Residues	45
Details	Repeat: {"description":"LRR 2","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI3
Number of Residues	45
Details	Repeat: {"description":"LRR 3","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI4
Number of Residues	46
Details	Repeat: {"description":"LRR 4","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI5
Number of Residues	22
Details	Repeat: {"description":"LRR 5","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI6
Number of Residues	24
Details	Repeat: {"description":"LRR 6","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI7
Number of Residues	23
Details	Repeat: {"description":"LRR 7","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI8
Number of Residues	22
Details	Repeat: {"description":"LRR 8","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI9
Number of Residues	23
Details	Repeat: {"description":"LRR 9","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI10
Number of Residues	22
Details	Repeat: {"description":"LRR 10","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI11
Number of Residues	23
Details	Repeat: {"description":"LRR 11","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI12
Number of Residues	23
Details	Repeat: {"description":"LRR 12","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI13
Number of Residues	23
Details	Repeat: {"description":"LRR 13","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI14
Number of Residues	22
Details	Repeat: {"description":"LRR 14","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI15
Number of Residues	21
Details	Repeat: {"description":"LRR 15","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI16
Number of Residues	24
Details	Repeat: {"description":"LRR 16","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI17
Number of Residues	22
Details	Repeat: {"description":"LRR 17","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI18
Number of Residues	24
Details	Repeat: {"description":"LRR 18","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI19
Number of Residues	22
Details	Repeat: {"description":"LRR 19","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Residue

Details

site_id	SWS_FT_FI20
Number of Residues	24
Details	Repeat: {"description":"LRR 20","evidences":[{"evidenceCode":"ECO:0000255"}]}

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Details

site_id	SWS_FT_FI21
Number of Residues	22
Details	Repeat: {"description":"LRR 21","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI22
Number of Residues	12
Details	Region: {"description":"CLE peptide binding","evidences":[{"source":"PubMed","id":"27055373","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GR9","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI23
Number of Residues	3
Details	Site: {"description":"CLE peptide binding","evidences":[{"source":"PubMed","id":"27055373","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GR9","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI24
Number of Residues	6
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI25
Number of Residues	3
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27055373","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"APR-2016","submissionDatabase":"PDB data bank","title":"Crystal structure of a TDIF-TDR complex.","authors":["Xu G.","Li Z."]}},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GR9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JFI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JFK","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI26
Number of Residues	2
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI27
Number of Residues	3
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27055373","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GR9","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI28
Number of Residues	1
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI29
Number of Residues	2
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27055373","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27498761","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"APR-2016","submissionDatabase":"PDB data bank","title":"Crystal structure of a TDIF-TDR complex.","authors":["Xu G.","Li Z."]}},{"source":"PDB","id":"5GIJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GR9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JFI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JFK","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI30
Number of Residues	2
Details	Modified residue: {"description":"Hydroxyproline","evidences":[{"source":"UniProtKB","id":"O49519","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI31
Number of Residues	1
Details	Glycosylation: {"description":"O-linked (Ara...) hydroxyproline","evidences":[{"source":"UniProtKB","id":"O49519","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI32
Number of Residues	40
Details	Region: {"description":"PSKR1 binding","evidences":[{"source":"PubMed","id":"26308901","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4Z61","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI33
Number of Residues	2
Details	Region: {"description":"CLE44 binding","evidences":[{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI34
Number of Residues	29
Details	Region: {"description":"Leucine-rich repeat receptor-like protein kinase binding","evidences":[{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29735985","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6G3W","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI35
Number of Residues	23
Details	Region: {"description":"Leucine-rich repeat receptor-like protein kinase binding","evidences":[{"source":"PubMed","id":"29735985","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6G3W","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI36
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"Q94AG2","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI37
Number of Residues	2
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"26308901","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27449136","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4Z61","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GQR","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)