5GKG
Structure of EndoMS-dsDNA1'' complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000014 | molecular_function | single-stranded DNA endodeoxyribonuclease activity |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0004519 | molecular_function | endonuclease activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006259 | biological_process | DNA metabolic process |
B | 0000014 | molecular_function | single-stranded DNA endodeoxyribonuclease activity |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003677 | molecular_function | DNA binding |
B | 0004519 | molecular_function | endonuclease activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006259 | biological_process | DNA metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue MG A 301 |
Chain | Residue |
A | GLU179 |
A | GLN192 |
C | DA5 |
C | DC6 |
D | DG5 |
D | DA6 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MPD A 302 |
Chain | Residue |
A | THR10 |
A | GLU16 |
B | ASP172 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue MG B 301 |
Chain | Residue |
B | GLU179 |
B | GLN192 |
C | DA5 |
C | DC6 |
D | DG5 |
D | DA6 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue MPD C 101 |
Chain | Residue |
A | GLU156 |
C | DA5 |
C | DG12 |
D | DG5 |
D | DA12 |
D | DG13 |
site_id | AC5 |
Number of Residues | 7 |
Details | binding site for residue MPD C 102 |
Chain | Residue |
B | GLU156 |
C | DC6 |
C | DG12 |
D | DG5 |
D | DA6 |
D | DA12 |
D | DG13 |
site_id | AC6 |
Number of Residues | 10 |
Details | binding site for residue MPD D 101 |
Chain | Residue |
B | GLU73 |
B | TRP77 |
C | DA7 |
C | DG8 |
C | DG9 |
C | DT10 |
C | DC11 |
D | DC7 |
D | DG8 |
D | DT11 |
site_id | AC7 |
Number of Residues | 11 |
Details | binding site for residue MPD D 102 |
Chain | Residue |
A | GLU73 |
A | TRP77 |
C | DA7 |
C | DG8 |
C | DG9 |
C | DT10 |
C | DC11 |
D | DC7 |
D | DG8 |
D | DG10 |
D | DT11 |