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5GKD

Structure of PL6 family alginate lyase AlyGC

Functional Information from GO Data
ChainGOidnamespacecontents
A0046872molecular_functionmetal ion binding
B0046872molecular_functionmetal ion binding
C0046872molecular_functionmetal ion binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CA A 801
ChainResidue
AASN181
AGLU184
AGLU213
AGLU215
APO4804
AHOH933

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL A 802
ChainResidue
AASN302
AHOH925
ATHR190
ASER191
ALYS220

site_idAC3
Number of Residues7
Detailsbinding site for residue PO4 A 803
ChainResidue
AARG95
ATYR130
AARG154
AHOH910
AHOH951
AHOH959
AHOH1108

site_idAC4
Number of Residues12
Detailsbinding site for residue PO4 A 804
ChainResidue
AASN181
AGLU184
AGLU215
ASER218
ALYS220
AARG241
ACA801
ACO3806
AHOH925
AHOH1029
AHOH1065
AHOH1239

site_idAC5
Number of Residues6
Detailsbinding site for residue PO4 A 805
ChainResidue
AARG68
AARG96
AHOH966
AHOH1366
DASP449
DHOH1033

site_idAC6
Number of Residues6
Detailsbinding site for residue CO3 A 806
ChainResidue
AGLU215
AARG241
AARG265
ATYR304
APO4804
AHOH933

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL A 807
ChainResidue
ALYS7
AASN29
ATHR31
ATRP32
AHOH908
AHOH909

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL A 808
ChainResidue
AASP421
AVAL423
AGLY424
AVAL425
ASER426
AHOH901
AHOH905

site_idAC9
Number of Residues6
Detailsbinding site for residue CA B 801
ChainResidue
BASN181
BGLU184
BGLU213
BGLU215
BPO4804
BHOH972

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL B 802
ChainResidue
BTHR190
BSER191
BLYS220
BASN302
BHOH939
BHOH969

site_idAD2
Number of Residues8
Detailsbinding site for residue PO4 B 803
ChainResidue
BARG95
BTYR130
BARG154
BHOH929
BHOH977
BHOH1008
BHOH1121
BHOH1206

site_idAD3
Number of Residues11
Detailsbinding site for residue PO4 B 804
ChainResidue
BASN181
BGLU184
BGLU215
BSER218
BLYS220
BARG241
BCA801
BCO3806
BHOH939
BHOH1059
BHOH1221

site_idAD4
Number of Residues3
Detailsbinding site for residue PO4 B 805
ChainResidue
BARG68
BARG96
BHOH949

site_idAD5
Number of Residues5
Detailsbinding site for residue CO3 B 806
ChainResidue
BARG241
BARG265
BTYR304
BPO4804
BHOH972

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL B 807
ChainResidue
BLYS7
BASN29
BHOH958
BHOH1095

site_idAD7
Number of Residues5
Detailsbinding site for residue GOL B 808
ChainResidue
BGLU422
BVAL423
BVAL425
BSER426
BASP421

site_idAD8
Number of Residues1
Detailsbinding site for residue GOL B 809
ChainResidue
BHOH908

site_idAD9
Number of Residues6
Detailsbinding site for residue CA C 801
ChainResidue
CASN181
CGLU184
CGLU213
CGLU215
CPO4804
CHOH1030

site_idAE1
Number of Residues5
Detailsbinding site for residue GOL C 802
ChainResidue
CTHR190
CSER191
CLYS220
CASN302
CHOH940

site_idAE2
Number of Residues6
Detailsbinding site for residue PO4 C 803
ChainResidue
CARG95
CTYR130
CARG154
CHOH916
CHOH1227
CHOH1247

site_idAE3
Number of Residues13
Detailsbinding site for residue PO4 C 804
ChainResidue
CASN181
CGLU184
CGLU215
CSER218
CLYS220
CARG241
CCA801
CCO3806
CHOH940
CHOH998
CHOH1030
CHOH1145
CHOH1166

site_idAE4
Number of Residues4
Detailsbinding site for residue PO4 C 805
ChainResidue
CARG68
CARG96
CHOH930
CHOH1071

site_idAE5
Number of Residues6
Detailsbinding site for residue CO3 C 806
ChainResidue
CGLU215
CARG241
CARG265
CTYR304
CPO4804
CHOH1030

site_idAE6
Number of Residues3
Detailsbinding site for residue GOL C 807
ChainResidue
CLYS7
CASN29
CTRP32

site_idAE7
Number of Residues4
Detailsbinding site for residue GOL C 808
ChainResidue
CASP421
CVAL423
CGLY424
CSER426

site_idAE8
Number of Residues2
Detailsbinding site for residue GOL C 809
ChainResidue
CTYR575
CGLU577

site_idAE9
Number of Residues6
Detailsbinding site for residue CA D 801
ChainResidue
DASN181
DGLU184
DGLU213
DGLU215
DPO4804
DHOH1103

site_idAF1
Number of Residues4
Detailsbinding site for residue GOL D 802
ChainResidue
DSER191
DLYS220
DASN302
DHOH998

site_idAF2
Number of Residues3
Detailsbinding site for residue PO4 D 803
ChainResidue
DARG95
DARG154
DHOH906

site_idAF3
Number of Residues12
Detailsbinding site for residue PO4 D 804
ChainResidue
DASN181
DGLU184
DGLU215
DLYS220
DARG241
DCA801
DCO3806
DHOH934
DHOH956
DHOH998
DHOH1014
DHOH1103

site_idAF4
Number of Residues4
Detailsbinding site for residue PO4 D 805
ChainResidue
DARG68
DARG96
DHOH902
DHOH910

site_idAF5
Number of Residues6
Detailsbinding site for residue CO3 D 806
ChainResidue
DGLU215
DARG241
DARG265
DTYR304
DPO4804
DHOH1103

site_idAF6
Number of Residues4
Detailsbinding site for residue GOL D 807
ChainResidue
DLYS7
DASN29
DTHR31
DHOH923

site_idAF7
Number of Residues7
Detailsbinding site for residue GOL D 808
ChainResidue
DASP421
DGLU422
DVAL423
DGLY424
DVAL425
DSER426
DHOH1040

site_idAF8
Number of Residues2
Detailsbinding site for residue GOL D 809
ChainResidue
DTYR575
DHOH951

219140

PDB entries from 2024-05-01

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