5G5G
Escherichia coli Periplasmic Aldehyde Oxidase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
B | 0005515 | molecular_function | protein binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016903 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors |
B | 0019439 | biological_process | obsolete aromatic compound catabolic process |
B | 0042597 | cellular_component | periplasmic space |
B | 0046872 | molecular_function | metal ion binding |
B | 0047770 | molecular_function | carboxylate reductase activity |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
B | 0071949 | molecular_function | FAD binding |
B | 0110095 | biological_process | cellular detoxification of aldehyde |
B | 1990204 | cellular_component | oxidoreductase complex |
C | 0005506 | molecular_function | iron ion binding |
C | 0005515 | molecular_function | protein binding |
C | 0006974 | biological_process | DNA damage response |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016903 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors |
C | 0019439 | biological_process | obsolete aromatic compound catabolic process |
C | 0030151 | molecular_function | molybdenum ion binding |
C | 0042597 | cellular_component | periplasmic space |
C | 0046872 | molecular_function | metal ion binding |
C | 0047770 | molecular_function | carboxylate reductase activity |
C | 0110095 | biological_process | cellular detoxification of aldehyde |
C | 1990204 | cellular_component | oxidoreductase complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FES A 230 |
Chain | Residue |
A | GLN157 |
A | CYS158 |
A | GLY159 |
A | CYS161 |
A | CYS208 |
A | ARG209 |
A | CYS210 |
site_id | AC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE FES A 231 |
Chain | Residue |
A | ASP100 |
A | GLY102 |
A | GLN103 |
A | CYS104 |
A | GLY105 |
A | CYS107 |
A | CYS119 |
A | GLY98 |
A | CYS99 |
site_id | AC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD A 1227 |
Chain | Residue |
C | ARG272 |
site_id | AC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CL A 1228 |
Chain | Residue |
A | GLY113 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL A 1229 |
Chain | Residue |
A | GLN103 |
A | GOL1232 |
C | ARG272 |
C | ASP655 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 1231 |
Chain | Residue |
A | ARG114 |
B | ASP77 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 1232 |
Chain | Residue |
A | HIS101 |
A | GLN103 |
A | CL1229 |
A | HOH2076 |
A | HOH2175 |
B | ASP36 |
B | TYR123 |
C | PRO273 |
C | ASP655 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 1233 |
Chain | Residue |
A | HIS153 |
A | ASN215 |
A | HOH2169 |
C | ARG623 |
C | CL1737 |
site_id | AC9 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SF4 B 320 |
Chain | Residue |
B | CYS119 |
B | CYS129 |
B | ASN130 |
B | LYS131 |
B | CYS138 |
B | ALA156 |
B | CYS157 |
B | ILE158 |
B | ALA159 |
site_id | BC1 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE FAD B 321 |
Chain | Residue |
A | GLY102 |
B | LYS26 |
B | PHE27 |
B | ALA29 |
B | GLY30 |
B | GLY31 |
B | THR32 |
B | ASN33 |
B | LEU34 |
B | GLY98 |
B | ALA99 |
B | LEU103 |
B | ALA107 |
B | THR108 |
B | ALA110 |
B | GLY111 |
B | ASN112 |
B | LEU114 |
B | GLN115 |
B | SER163 |
B | ASP164 |
B | LEU212 |
B | ILE213 |
B | LYS230 |
B | ALA238 |
B | PHE239 |
B | HOH2017 |
B | HOH2027 |
B | HOH2054 |
B | HOH2063 |
B | HOH2093 |
B | HOH2245 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL B 1318 |
Chain | Residue |
B | HOH2080 |
C | HOH2058 |
C | HOH2533 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL B 1319 |
Chain | Residue |
B | GLY135 |
B | LYS199 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL B 1320 |
Chain | Residue |
B | ARG170 |
B | GLU269 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 1321 |
Chain | Residue |
B | THR62 |
B | ASP63 |
B | ALA64 |
B | HOH2047 |
B | HOH2058 |
site_id | BC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 1322 |
Chain | Residue |
B | LYS264 |
B | TRP266 |
B | ARG267 |
B | ILE268 |
B | HOH2148 |
B | HOH2150 |
B | IOD3000 |
site_id | BC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 1323 |
Chain | Residue |
B | ALA238 |
B | PHE239 |
B | HOH2246 |
B | HOH2247 |
B | HOH2248 |
C | ALA657 |
C | GLU660 |
B | GLN147 |
site_id | BC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD B 3000 |
Chain | Residue |
B | GOL1322 |
site_id | BC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE CSD C 395 |
Chain | Residue |
C | VAL387 |
C | THR393 |
C | ARG394 |
C | PHE396 |
C | TYR581 |
C | GLN582 |
C | HOH2392 |
C | HOH2401 |
site_id | CC1 |
Number of Residues | 33 |
Details | BINDING SITE FOR RESIDUE MCN C 921 |
Chain | Residue |
A | GLN157 |
A | CYS210 |
C | GLY240 |
C | GLY241 |
C | PHE242 |
C | GLY243 |
C | ARG350 |
C | ILE468 |
C | GLY469 |
C | THR470 |
C | GLY471 |
C | SER472 |
C | GLY507 |
C | GLY508 |
C | GLN509 |
C | TRP510 |
C | GLY511 |
C | ALA512 |
C | ALA613 |
C | ARG615 |
C | LEU617 |
C | ASN618 |
C | THR621 |
C | GLN625 |
C | ALA687 |
C | LYS688 |
C | VAL690 |
C | GLY691 |
C | GLU692 |
C | MOS922 |
C | HOH2463 |
C | HOH2464 |
C | HOH2479 |
site_id | CC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE MOS C 922 |
Chain | Residue |
C | GLN211 |
C | GLY243 |
C | LEU246 |
C | ALA348 |
C | MET349 |
C | ARG350 |
C | PRO352 |
C | GLY508 |
C | GLU692 |
C | MCN921 |
C | HOH2558 |
site_id | CC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE IOD C 1732 |
Chain | Residue |
C | ASN47 |
site_id | CC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL C 1735 |
Chain | Residue |
C | ARG527 |
C | HOH2016 |
site_id | CC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CL C 1737 |
Chain | Residue |
A | GOL1233 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL C 1738 |
Chain | Residue |
A | ALA53 |
C | PHE674 |
C | HOH2068 |
site_id | CC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT C 1739 |
Chain | Residue |
C | ARG440 |
C | HOH2437 |
C | HOH2558 |
site_id | CC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT C 1740 |
Chain | Residue |
C | VAL320 |
C | GLU324 |
site_id | CC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 1741 |
Chain | Residue |
C | GLU641 |
C | TYR717 |
C | LYS723 |
site_id | DC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL C 1742 |
Chain | Residue |
C | ILE25 |
C | ASP26 |
C | TYR237 |
C | GLN295 |
C | ALA492 |
C | VAL493 |
C | HOH2472 |
Functional Information from PROSITE/UniProt
site_id | PS00197 |
Number of Residues | 9 |
Details | 2FE2S_FER_1 2Fe-2S ferredoxin-type iron-sulfur binding region signature. CDHGQCGAC |
Chain | Residue | Details |
A | CYS99-CYS107 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: Proton acceptor => ECO:0000305|PubMed:19368556 |
Chain | Residue | Details |
C | GLU692 | |
B | THR108 | |
B | CYS119 | |
B | CYS129 | |
B | CYS138 | |
B | CYS157 | |
B | ASP164 | |
B | ILE213 | |
B | LYS230 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:27622978, ECO:0007744|PDB:5G5G, ECO:0007744|PDB:5G5H |
Chain | Residue | Details |
C | GLY241 | |
C | ILE468 | |
C | GLY511 | |
C | ARG615 | |
C | GLN625 | |
C | LYS688 |