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5G1B

Bordetella Alcaligenes HDAH native

Functional Information from GO Data
ChainGOidnamespacecontents
A0004407molecular_functionhistone deacetylase activity
A0040029biological_processepigenetic regulation of gene expression
B0004407molecular_functionhistone deacetylase activity
B0040029biological_processepigenetic regulation of gene expression
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 370
ChainResidue
AASP180
AHIS182
AASP268
AHOH2277
AHOH2309

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K A 371
ChainResidue
ALEU202
AASP178
AASP180
AHIS182
ASER201

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 372
ChainResidue
ATRP191
AASP194
AVAL197
ATYR226
AHOH2314
AHOH2320

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 1PE A 373
ChainResidue
AARG173
APRO195
AASN222
ATYR226
AHOH2303
AHOH2304
AHOH2325
AHOH2354
AHOH2395
AHOH2484

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PEG A 374
ChainResidue
AARG355

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PEG A 375
ChainResidue
APRO61
AALA63
AHOH2049
AHOH2486

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 370
ChainResidue
BASP180
BHIS182
BASP268
BHOH2228
BHOH2253

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K B 371
ChainResidue
BASP178
BASP180
BHIS182
BSER201
BLEU202

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K B 372
ChainResidue
BTRP191
BASP194
BVAL197
BTHR199
BTYR226
BHOH2258
BHOH2264

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 1PE B 373
ChainResidue
BGLU172
BARG173
BPRO195
BASN222
BHOH2420

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PEG B 374
ChainResidue
BARG355
BHOH2421

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PEG B 375
ChainResidue
BASP189
BTRP192
BASP211
BGLU217

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG B 376
ChainResidue
APRO145
AASN147
AHOH2278
BTHR127
BHOH2424

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"UniProtKB","id":"Q48935","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27756124","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5G1C","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Polarizes the scissile carbonyl of the substrate","evidences":[{"source":"UniProtKB","id":"Q48935","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

251422

PDB entries from 2026-04-01

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