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5FY1

Crystal structure of JmjC domain of human histone demethylase UTY in complex with N08619b

Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 2345
ChainResidue
ACYS1278
ACYS1281
ACYS1305
ACYS1308

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 2352
ChainResidue
BCYS1278
BCYS1281
BCYS1305
BCYS1308

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 2353
ChainResidue
BGLU1095
BHIS1173
BHOH2133
BHOH2142
BHOH2185
BHIS1093

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 2346
ChainResidue
AHIS1093
AGLU1095
AHIS1173
AHOH2148
AHOH2149
AHOH2156

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 0R0 A 2347
ChainResidue
AMET944
AHIS976
BGLU1294
BTHR1312
BASN1318
BPHE1319

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 0R0 A 2348
ChainResidue
ATHR1292
AGLU1294
ATHR1312
AASN1318
BMET944
BHIS976

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS B 2354
ChainResidue
BLYS1084
BTHR1090
BASN1103
BVAL1175
BASN1183
BHOH2129
BHOH2185

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DMS A 2349
ChainResidue
ALYS1084
ATHR1090
AASN1103
AVAL1175
AASN1183
AHOH2143
AHOH2149
AHOH2159

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS A 2350
ChainResidue
AASN1096
AASN1097
AARG1202
AASN1206
ALYS1212
APRO1214
AHOH2153

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2355
ChainResidue
BILE967
BTRP968
BARG969
BLEU1133

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 2351
ChainResidue
ASER932
ATHR933
APRO1108
AHOH2039
AEDO2352
AEDO2356

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2352
ChainResidue
APHE990
AHOH2081
AEDO2351

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2353
ChainResidue
AASN884
AHOH2004
BGLU997
BASN998
BGLU999

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 2354
ChainResidue
AHIS1267
AGLU1273
AHIS1276
ATYR1301

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 2355
ChainResidue
AGLY919
AALA921
AGLY922
APRO1161
AGLY1162
AASP1163

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2356
ChainResidue
ALYS895
BVAL1123
BASP1126
BPHE1127
BHOH2176
BHOH2282

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2357
ChainResidue
BPRO1108
BTRP1180
BHOH2080
BEDO2358

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2358
ChainResidue
BSER932
BTHR933
BGLY1107
BASN1182
BEDO2357
BEDO2364

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2356
ChainResidue
AGLY929
AILE1106
AGLY1107
AEDO2351
ALEU928

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2359
ChainResidue
BLEU1050
BARG1058
BVAL1059
BVAL1060
BHOH2113

site_idCC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2360
ChainResidue
BHIS943
BASP1036
BASP1039
BLYS1042
BHOH2097

site_idCC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 2361
ChainResidue
BLYS1207
BSER1210
BVAL1211
BCYS1281
BVAL1283
BHOH2197
BHOH2286

site_idCC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 2362
ChainResidue
BGLY1075
BGLN1080
BTYR1082
BGLU1095
BSER1101
BHOH2126
BHOH2133

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2357
ChainResidue
ATHR908
AASN1168
APRO1190
ATHR1192
ACYS1194

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 2358
ChainResidue
AGLY1109
AGLY1179
ATRP1180
BHOH2153

site_idCC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 2363
ChainResidue
AARG1160
BPHE990
BSER993

site_idCC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2359
ChainResidue
APRO910
AASN1168
AALA1169
ATHR1171
AHOH2169

site_idDC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 2360
ChainResidue
AGLY1075
AGLN1080
ATYR1082
AGLU1095
AALA1185
ATRP1186
AHOH2148

site_idDC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 2364
ChainResidue
BLEU928
BGLY929
BSER932
BILE1106
BGLY1107
BPRO1108
BEDO2358

site_idDC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 2365
ChainResidue
BTHR977
BLYS1030

site_idDC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2366
ChainResidue
BGLN1249
BHIS1306
BASP1307
BHOH2262
BHOH2263
BEDO2368

site_idDC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2367
ChainResidue
BTHR908
BCYS1100
BASN1168
BPRO1190
BTHR1192
BCYS1194

site_idDC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO B 2368
ChainResidue
ALEU1341
AHOH2301
BVAL1285
BPHE1286
BHOH2248
BHOH2249
BHOH2250
BEDO2366

site_idDC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 2361
ChainResidue
ALYS1229
AVAL1230
ASER1231
AASP1232

site_idDC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2362
ChainResidue
ALEU1047
AHOH2113
AHOH2123

site_idDC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 2369
ChainResidue
ALYS1229
BLYS1311

site_idEC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2370
ChainResidue
BPRO910
BPRO913
BASN1168
BALA1169
BHOH2156
BHOH2157

site_idEC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2363
ChainResidue
ACYS970
AGLU971
ASER1138
ASER1139
AHOH2073

site_idEC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 2371
ChainResidue
BHIS1304
BHOH2254

site_idEC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 2364
ChainResidue
ATYR1334
AASP1335

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues326
DetailsDomain: {"description":"JmjC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24798337","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"24798337","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

250359

PDB entries from 2026-03-11

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