Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FY0

Crystal structure of JmjC domain of human histone demethylase UTY in complex with L-malate

Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 4002
ChainResidue
ACYS1278
ACYS1281
ACYS1305
ACYS1308

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 4002
ChainResidue
BCYS1278
BCYS1281
BCYS1305
BCYS1308

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 2345
ChainResidue
BGLU1095
BHIS1173
BHOH2130
BHOH2137
BLMR2346
BHIS1093

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 2345
ChainResidue
AHIS1093
AGLU1095
AHIS1173
AHOH2142
AHOH2150
ALMR2346
AEDO2353

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE LMR B 2346
ChainResidue
BTYR1082
BLYS1084
BTHR1090
BHIS1093
BASN1103
BTRP1113
BHIS1173
BASN1183
BHOH2123
BHOH2125
BHOH2137
BMN2345

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE LMR A 2346
ChainResidue
ATYR1082
ALYS1084
ATHR1090
AHIS1093
AASN1103
ATRP1113
AHIS1173
AVAL1175
AASN1183
AHOH2137
AHOH2150
AMN2345

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2347
ChainResidue
BILE967
BTRP968
BARG969
BASN1131

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 2347
ChainResidue
ASER932
ATHR933
AGLN986
APRO1108
AASN1182
AEDO2348
AEDO2352

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2348
ChainResidue
APHE990
AHOH2073
AEDO2347

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2349
ChainResidue
AARG1156
AHOH2004
BGLU999

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 2350
ChainResidue
AHIS1267
AGLU1273
AHIS1276
ATYR1301

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 2351
ChainResidue
AGLY919
AGLY922
APRO1161
AGLY1162
AASP1163
AHOH2179
AHOH2306
AHOH2307

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2348
ChainResidue
ALYS895
BVAL1123
BASP1126
BPHE1127
BHOH2280

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2349
ChainResidue
BPHE990
BPRO1108
BTRP1180
BHOH2073
BHOH2281
BEDO2350

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2350
ChainResidue
BTHR933
BGLN986
BPRO1108
BASN1182
BEDO2349

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 2352
ChainResidue
ALEU928
AGLY929
ASER932
AILE1106
AGLY1107
AHOH2155
AEDO2347

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2351
ChainResidue
BVAL1059
BVAL1060
BHOH2104
BHOH2114
BLEU1050
BARG1058

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 2353
ChainResidue
AGLY1075
AGLU1095
ATRP1186
AASN1187
AHOH2142
AMN2345

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2352
ChainResidue
BHIS943
BASP1036
BASP1039
BHOH2038

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2353
ChainResidue
BLYS1207
BCYS1281
BGLU1282
BVAL1283
BHOH2186

site_idCC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO B 2354
ChainResidue
BGLY1075
BGLN1080
BTYR1082
BGLU1095
BSER1101
BASN1187
BHOH2122
BHOH2123
BHOH2130
BHOH2137

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:24798337
ChainResidueDetails
ACYS1308
BHIS1093
BGLU1095
BHIS1173
BCYS1278
BCYS1281
BCYS1305
BCYS1308
AHIS1093
AGLU1095
AHIS1173
ACYS1278
ACYS1281
ACYS1305

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:24798337
ChainResidueDetails
ATHR887
BTHR887

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon