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5FUN

Crystal structure of human JARID1B in complex with GSK467

Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1754
ChainResidue
ACYS692
ACYS695
ACYS715
AHIS718

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1755
ChainResidue
ACYS706
ACYS708
ACYS723
ACYS725

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GZA A 1756
ChainResidue
ATYR425
ATYR488
ASER495
APHE496
AHIS499
AASN509
ALYS517
ATRP519
AHIS587
AMN1757
AHOH2079
AHOH2086
AHOH2090
AHOH2166
AARG86

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 1757
ChainResidue
AHIS499
AGLU501
AHIS587
AGZA1756
AHOH2079
AHOH2086

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA A 1758
ChainResidue
ALEU90
AASN91
ALEU413
ATHR416
AGLU419
AHOH2023
AHOH2025

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 1759
ChainResidue
AHIS622
ALYS694
AHIS718
AHOH2116

site_idAC7
Number of Residues12
DetailsBINDING SITE FOR RESIDUE EPE A 1760
ChainResidue
AILE500
ATRP504
AMET534
ALEU541
ALEU552
AARG584
AHIS617
ATYR618
ALEU621
AARG623
AHOH2075
AHOH2084

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1761
ChainResidue
AILE475
AALA477
APHE627
ASER628
AGLU631
AMET632
AHOH2147

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1762
ChainResidue
AASP688
AGLU689
AARG690
AGLN691
AVAL693
AGLY711
ALEU712
ALEU713

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1763
ChainResidue
AARG670
AVAL674
AILE675

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1764
ChainResidue
AALA386
AASP387
ALYS390
AMET491
ACYS492
AGLU515
AGLY593
APHE594

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues52
DetailsZN_FING: C5HC2 => ECO:0000269|PubMed:26741168, ECO:0000269|PubMed:27214403, ECO:0000269|PubMed:28262558
ChainResidueDetails
ACYS692-MET744

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P29375
ChainResidueDetails
ATYR425
ASER507
AASN509
ALYS517

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:26741168, ECO:0000305|PubMed:27214403, ECO:0000305|PubMed:28262558
ChainResidueDetails
AHIS499
AGLU501
AHIS587

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS769

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PDB entries from 2024-07-31

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