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5FJH

Crystal structure of human JMJD2C catalytic domain in complex with epitherapuetic compound 2-(((2-((2-(dimethylamino)ethyl) (ethyl)amino) -2-oxoethyl)amino)methyl)isonicotinic acid

Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NI A 1348
ChainResidue
AHIS190
AGLU192
AHIS278
AMMK1349
AHOH2178

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NI B 1348
ChainResidue
BHOH2162
BHIS190
BGLU192
BHIS278
BMMK1349

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE MMK B 1349
ChainResidue
BTYR134
BASP137
BTYR179
BPHE187
BHIS190
BGLU192
BLYS208
BLYS243
BHIS278
BSER290
BTHR291
BASN292
BNI1348
BHOH2162
BHOH2255

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE MMK A 1349
ChainResidue
ATYR134
AASP137
ATYR179
APHE187
AHIS190
AGLU192
ALYS208
ATRP210
ALYS243
AHIS278
ASER290
ATHR291
AASN292
ANI1348
AHOH2178

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1350
ChainResidue
ACYS236
AHIS242
ACYS308
ACYS310

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1350
ChainResidue
BCYS236
BHIS242
BCYS308
BCYS310

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1352
ChainResidue
AHOH2274
AHOH2275
AHOH2276

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 1351
ChainResidue
AARG112
BTRP183
BHOH2155

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 1351
ChainResidue
AASN126
ATRP183
AHOH2137
AHOH2171
BARG112

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B2RXH2
ChainResidueDetails
ATYR134
ALYS208
ALYS243
BTYR134
BLYS208
BLYS243

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AHIS190
AGLU192
AHIS278
BHIS190
BGLU192
BHIS278

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASN200
BASN200

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:21914792
ChainResidueDetails
ACYS236
AHIS242
ACYS308
ACYS310
BCYS236
BHIS242
BCYS308
BCYS310

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PDB entries from 2025-07-02

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