Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FH8

Crystal structure of the fifth bromodomain of human PB1 in complex with compound 28

Functional Information from GO Data
ChainGOidnamespacecontents
A0006338biological_processchromatin remodeling
A0016586cellular_componentRSC-type complex
B0006338biological_processchromatin remodeling
B0016586cellular_componentRSC-type complex
C0006338biological_processchromatin remodeling
C0016586cellular_componentRSC-type complex
D0006338biological_processchromatin remodeling
D0016586cellular_componentRSC-type complex
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue 5XK A 801
ChainResidue
AILE683
AILE745
APHE684
AARG686
ALEU687
ATYR696
AMET704
AMET731
AALA735
AASN739

site_idAC2
Number of Residues2
Detailsbinding site for residue DMS A 802
ChainResidue
ATYR697
AASP705

site_idAC3
Number of Residues11
Detailsbinding site for residue 5XK B 801
ChainResidue
BILE683
BPHE684
BARG686
BLEU687
BLEU693
BTYR696
BMET704
BMET731
BALA735
BASN739
BILE745

site_idAC4
Number of Residues11
Detailsbinding site for residue 5XK C 801
ChainResidue
AILE683
CILE683
CPHE684
CARG686
CLEU687
CTYR696
CMET704
CMET731
CALA735
CASN739
CILE745

site_idAC5
Number of Residues9
Detailsbinding site for residue 5XK D 801
ChainResidue
DILE683
DPHE684
DLEU687
DTYR696
DMET704
DMET731
DALA735
DASN739
DILE745

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO D 802
ChainResidue
DMET658
DLYS661
DGLN719
DASP720
DILE721

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues58
DetailsBROMODOMAIN_1 Bromodomain signature. SaiFlrlpSrselp..DYYltIkkpMdmekIrshmmank..Yqdidsmvedfvm.MfnNActY
ChainResidueDetails
ASER681-TYR738

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21406692
ChainResidueDetails
ASER648
BSER648
CSER648
DSER648

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER689
BSER689
CSER689
DSER689

site_idSWS_FT_FI3
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS653
BLYS653
CLYS653
DLYS653

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon