5FD3
Structure of Lin54 tesmin domain bound to DNA
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 701 |
| Chain | Residue |
| A | CYS525 |
| A | CYS527 |
| A | CYS532 |
| A | CYS537 |
| A | ZN702 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue ZN A 702 |
| Chain | Residue |
| A | CYS554 |
| A | ZN701 |
| A | ZN703 |
| A | CYS525 |
| A | CYS532 |
| A | CYS546 |
| A | CYS551 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 703 |
| Chain | Residue |
| A | CYS525 |
| A | CYS539 |
| A | CYS546 |
| A | CYS549 |
| A | ZN702 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue ZN A 704 |
| Chain | Residue |
| A | CYS599 |
| A | CYS601 |
| A | CYS606 |
| A | CYS611 |
| A | ZN705 |
| A | ZN706 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue ZN A 705 |
| Chain | Residue |
| A | CYS599 |
| A | CYS606 |
| A | CYS620 |
| A | CYS626 |
| A | CYS629 |
| A | ZN704 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 706 |
| Chain | Residue |
| A | CYS599 |
| A | CYS613 |
| A | CYS620 |
| A | CYS624 |
| A | ZN704 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 701 |
| Chain | Residue |
| B | CYS525 |
| B | CYS527 |
| B | CYS532 |
| B | CYS537 |
| B | ZN702 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue ZN B 702 |
| Chain | Residue |
| B | CYS525 |
| B | CYS532 |
| B | CYS546 |
| B | CYS551 |
| B | CYS554 |
| B | ZN701 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 703 |
| Chain | Residue |
| B | CYS525 |
| B | CYS539 |
| B | CYS546 |
| B | CYS549 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue ZN B 704 |
| Chain | Residue |
| B | CYS599 |
| B | CYS601 |
| B | CYS606 |
| B | CYS611 |
| B | ZN705 |
| B | ZN706 |
| site_id | AD2 |
| Number of Residues | 6 |
| Details | binding site for residue ZN B 705 |
| Chain | Residue |
| B | CYS599 |
| B | CYS606 |
| B | CYS620 |
| B | CYS626 |
| B | CYS629 |
| B | ZN704 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 706 |
| Chain | Residue |
| B | CYS599 |
| B | CYS613 |
| B | CYS620 |
| B | CYS624 |
| B | ZN704 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 52 |
| Details | Region: {"description":"DNA-binding","evidences":[{"source":"PubMed","id":"27465258","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 36 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"5FD3","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Site: {"description":"Critical for interaction with target DNA","evidences":[{"source":"PubMed","id":"27465258","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Site: {"description":"Interaction with DNA","evidences":[{"source":"PubMed","id":"27465258","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
