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5FAW

T502A mutant of choline TMA-lyase

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005829cellular_componentcytosol
A0016829molecular_functionlyase activity
A0016840molecular_functioncarbon-nitrogen lyase activity
A0033265molecular_functioncholine binding
A0042426biological_processcholine catabolic process
A0042803molecular_functionprotein homodimerization activity
B0003824molecular_functioncatalytic activity
B0005829cellular_componentcytosol
B0016829molecular_functionlyase activity
B0016840molecular_functioncarbon-nitrogen lyase activity
B0033265molecular_functioncholine binding
B0042426biological_processcholine catabolic process
B0042803molecular_functionprotein homodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NA A 901
ChainResidue
ASER746
AMET748
AHOH1231
AHOH1489
AHOH1646
BHOH1604

site_idAC2
Number of Residues7
Detailsbinding site for residue MLI A 902
ChainResidue
AHOH1061
AHOH1138
AHOH1175
AHOH1644
AARG572
ALEU689
AHOH1018

site_idAC3
Number of Residues6
Detailsbinding site for residue MLI A 903
ChainResidue
AARG238
ATHR633
AGLN636
AHOH1070
AHOH1356
AHOH1483

site_idAC4
Number of Residues6
Detailsbinding site for residue MLI A 904
ChainResidue
ALYS102
AARG105
ATYR106
AHOH1239
AHOH1400
AHOH1596

site_idAC5
Number of Residues9
Detailsbinding site for residue MLI A 905
ChainResidue
AGLY49
ASER50
AHIS51
AHOH1044
AHOH1048
AHOH1075
AHOH1077
AHOH1107
BLYS71

site_idAC6
Number of Residues7
Detailsbinding site for residue MLI A 906
ChainResidue
AHIS519
AASP535
ALEU536
AHOH1017
AHOH1179
AHOH1236
AHOH1525

site_idAC7
Number of Residues6
Detailsbinding site for residue NA A 907
ChainResidue
AGLU242
ALEU244
AHOH1013
AHOH1260
AHOH1665
AHOH1786

site_idAC8
Number of Residues9
Detailsbinding site for residue CHT A 908
ChainResidue
ATYR208
AASP216
AGLY335
AMET487
AGLY488
ACYS489
AGLU491
ATYR506
ALEU698

site_idAC9
Number of Residues6
Detailsbinding site for residue MLI B 901
ChainResidue
BSER50
BHIS51
BMET52
BGLY53
BHOH1072
BHOH1247

site_idAD1
Number of Residues10
Detailsbinding site for residue CHT B 902
ChainResidue
BTYR208
BASP216
BTHR334
BGLY335
BGLY488
BCYS489
BGLU491
BALA502
BTYR506
BLEU698

Functional Information from PROSITE/UniProt
site_idPS00850
Number of Residues9
DetailsGLY_RADICAL_1 Glycine radical domain signature. VvRVAGYSA
ChainResidueDetails
AVAL816-ALA824

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Cysteine radical intermediate => ECO:0000255|HAMAP-Rule:MF_02058, ECO:0000305|PubMed:23151509, ECO:0000305|PubMed:24854437
ChainResidueDetails
ACYS489
BCYS489

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_02058, ECO:0000305|PubMed:24854437
ChainResidueDetails
AGLU491
BGLU491

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Glycine radical => ECO:0000255|HAMAP-Rule:MF_02058, ECO:0000305|PubMed:23151509, ECO:0000305|PubMed:24854437
ChainResidueDetails
AGLY821
BGLY821

221051

PDB entries from 2024-06-12

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