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5F5W

Crystal structure of the alpha subunit of glycyl tRNA synthetase (GlyRS) from Aquifex aeolicus in complex with an analog of glycyl adenylate (Gly-SA)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004820molecular_functionglycine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006412biological_processtranslation
A0006426biological_processglycyl-tRNA aminoacylation
B0000166molecular_functionnucleotide binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004820molecular_functionglycine-tRNA ligase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006412biological_processtranslation
B0006426biological_processglycyl-tRNA aminoacylation
C0000166molecular_functionnucleotide binding
C0004812molecular_functionaminoacyl-tRNA ligase activity
C0004820molecular_functionglycine-tRNA ligase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006412biological_processtranslation
C0006426biological_processglycyl-tRNA aminoacylation
D0000166molecular_functionnucleotide binding
D0004812molecular_functionaminoacyl-tRNA ligase activity
D0004820molecular_functionglycine-tRNA ligase activity
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0006412biological_processtranslation
D0006426biological_processglycyl-tRNA aminoacylation
E0000166molecular_functionnucleotide binding
E0004812molecular_functionaminoacyl-tRNA ligase activity
E0004820molecular_functionglycine-tRNA ligase activity
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0006412biological_processtranslation
E0006426biological_processglycyl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue G5A A 300
ChainResidue
ATHR33
AGLU135
AILE136
ATHR137
AGLN138
AGLU156
ATHR158
AGLY160
AARG163
AARG58
AASP61
AASN69
AARG70
ALEU71
ATYR74
AGLN76
ATRP115

site_idAC2
Number of Residues18
Detailsbinding site for residue G5A B 300
ChainResidue
BTHR33
BARG58
BASP61
BASN69
BARG70
BLEU71
BTYR74
BGLN76
BTRP115
BGLU135
BILE136
BTHR137
BGLN138
BGLU156
BTHR158
BGLY160
BARG163
BHOH402

site_idAC3
Number of Residues17
Detailsbinding site for residue G5A C 300
ChainResidue
CTHR33
CARG58
CASP61
CASN69
CARG70
CLEU71
CTYR74
CGLN76
CTRP115
CGLU135
CILE136
CTHR137
CGLN138
CGLU156
CTHR158
CGLY160
CARG163

site_idAC4
Number of Residues17
Detailsbinding site for residue G5A D 300
ChainResidue
DTHR33
DARG58
DASP61
DASN69
DARG70
DLEU71
DTYR74
DGLN76
DTRP115
DGLU135
DILE136
DTHR137
DGLN138
DGLU156
DTHR158
DGLY160
DARG163

site_idAC5
Number of Residues17
Detailsbinding site for residue G5A E 300
ChainResidue
ETHR33
EARG58
EASP61
EASN69
EARG70
ELEU71
ETYR74
EGLN76
ETRP115
EGLU135
EILE136
ETHR137
EGLN138
EGLU156
ETHR158
EGLY160
EARG163

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PDB entries from 2024-07-17

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