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5F5C

Crystal Structure of human JMJD2D complexed with KDOPP7

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS238
AHIS244
ACYS310
ACYS312

site_idAC2
Number of Residues5
Detailsbinding site for residue NI A 402
ChainResidue
AHIS192
AGLU194
AHIS280
A5V3411
AHOH522

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO A 403
ChainResidue
AALA83
AGLY84
ATRP126
ASER250
AVAL253
AHOH541
AHOH645

site_idAC4
Number of Residues7
Detailsbinding site for residue EDO A 404
ChainResidue
ALYS150
AGLN151
ATRP152
AASN153
AHIS156
AHOH557
AHOH692

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 405
ChainResidue
APRO251
ATHR252
ALYS255
AARG263
AHOH740

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 406
ChainResidue
APHE118
AGLU122
AARG263
AILE264
ATHR265
AHOH509

site_idAC7
Number of Residues7
Detailsbinding site for residue SO4 A 407
ChainResidue
AARG60
AGLU61
ATHR62
AASN65
AHOH582
AHOH594
AHOH669

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 408
ChainResidue
AARG123
ALYS124
ALYS127
AASN128

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 A 409
ChainResidue
APRO113
ALYS124
AASN128
ATRP185
ALYS186

site_idAD1
Number of Residues9
Detailsbinding site for residue EDO A 410
ChainResidue
AALA105
AASN106
AGLN111
ATHR112
AGLY286
APHE287
AHOH513
AHOH577
AHOH837

site_idAD2
Number of Residues13
Detailsbinding site for residue 5V3 A 411
ChainResidue
ATYR136
ATYR179
ATYR181
APHE189
AHIS192
AGLU194
ASER200
ALYS210
ATRP212
AHIS280
AASN294
ANI402
AHOH522

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B2RXH2
ChainResidueDetails
ATYR136
AASN202
ALYS210
ALYS245

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000305|PubMed:26741168
ChainResidueDetails
AHIS192
AGLU194
AHIS280

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:5F5A, ECO:0007744|PDB:5F5C
ChainResidueDetails
ACYS238
AHIS244
ACYS310
ACYS312

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000269|PubMed:23102699
ChainResidueDetails
AGLU26
AGLU27

224004

PDB entries from 2024-08-21

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