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5EX5

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 7-deaza-ADP and inorganic phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0140662molecular_functionATP-dependent protein folding chaperone
B0005524molecular_functionATP binding
B0140662molecular_functionATP-dependent protein folding chaperone
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 501
ChainResidue
APO4502
A7DD503
AHOH612
AHOH620
AHOH643
AHOH693

site_idAC2
Number of Residues13
Detailsbinding site for residue PO4 A 502
ChainResidue
APRO173
AGLU201
ATHR229
AMG501
A7DD503
AHOH601
AHOH612
AHOH620
AHOH626
AHOH643
AGLY36
ATHR37
ALYS96

site_idAC3
Number of Residues28
Detailsbinding site for residue 7DD A 503
ChainResidue
ATHR37
ATHR38
ATYR39
AGLY226
AGLY227
AGLY255
AGLU293
ALYS296
AARG297
ASER300
AGLY363
AGLY364
ASER365
AARG367
AASP391
AMG501
APO4502
AHOH601
AHOH603
AHOH613
AHOH620
AHOH643
AHOH679
AHOH693
AHOH704
AHOH721
AHOH738
AHOH782

site_idAC4
Number of Residues6
Detailsbinding site for residue MG B 501
ChainResidue
BPO4502
B7DD503
BHOH608
BHOH622
BHOH624
BHOH691

site_idAC5
Number of Residues13
Detailsbinding site for residue PO4 B 502
ChainResidue
BGLY36
BTHR37
BLYS96
BPRO173
BGLU201
BTHR229
BMG501
B7DD503
BHOH601
BHOH608
BHOH622
BHOH624
BHOH630

site_idAC6
Number of Residues28
Detailsbinding site for residue 7DD B 503
ChainResidue
BTHR37
BTHR38
BTYR39
BGLY226
BGLY227
BGLY255
BGLU293
BLYS296
BARG297
BSER300
BGLY363
BGLY364
BSER365
BARG367
BILE368
BASP391
BMG501
BPO4502
BHOH601
BHOH602
BHOH617
BHOH622
BHOH624
BHOH654
BHOH662
BHOH681
BHOH691
BHOH712

Functional Information from PROSITE/UniProt
site_idPS00297
Number of Residues8
DetailsHSP70_1 Heat shock hsp70 proteins family signature 1. IDLGTTyS
ChainResidueDetails
AILE33-SER40

site_idPS00329
Number of Residues14
DetailsHSP70_2 Heat shock hsp70 proteins family signature 2. VFDLGGGTfdvSLL
ChainResidueDetails
AVAL222-LEU235

site_idPS01036
Number of Residues15
DetailsHSP70_3 Heat shock hsp70 proteins family signature 3. IvLvGGsTRIPkIqQ
ChainResidueDetails
AILE359-GLN373

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:21526763
ChainResidueDetails
AGLY36
BGLY364
ALYS96
AGLY227
AGLU293
AGLY364
BGLY36
BLYS96
BGLY227
BGLU293

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P06761
ChainResidueDetails
ASER86
BSER86

site_idSWS_FT_FI3
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS125
ALYS213
ALYS326
BLYS125
BLYS213
BLYS326

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: 3'-nitrotyrosine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ATYR160
BTYR160

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P0DMV8
ChainResidueDetails
ALYS271
BLYS271

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS353
BLYS353

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25114211, ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS352
BLYS352

site_idSWS_FT_FI8
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0007744|PubMed:25114211
ChainResidueDetails
ALYS353
BLYS353

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PDB entries from 2024-07-24

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