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5ENL

INHIBITION OF ENOLASE: THE CRYSTAL STRUCTURES OF ENOLASE-CA2+-PHOSPHOGLYCERATE AND ENOLASE-ZN2+-PHOSPHOGLYCOLATE COMPLEXES AT 2.2-ANGSTROMS RESOLUTION

Functional Information from GO Data
ChainGOidnamespacecontents
A0000015cellular_componentphosphopyruvate hydratase complex
A0000287molecular_functionmagnesium ion binding
A0000324cellular_componentfungal-type vacuole
A0004634molecular_functionphosphopyruvate hydratase activity
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006096biological_processglycolytic process
A0016829molecular_functionlyase activity
A0032889biological_processregulation of vacuole fusion, non-autophagic
A0046872molecular_functionmetal ion binding
A1904408molecular_functionmelatonin binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 438
ChainResidue
AASP246
AGLU295
AASP320
A2PG442
AHOH449
AHOH514
AHOH616

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 2PG A 442
ChainResidue
AGLU168
AGLU211
AASP246
ALYS345
ASER372
AHIS373
AARG374
ASER375
ALYS396
ACA438
AHOH514
AHOH524
AHOH525
AHOH528
AHOH716

site_idCAT
Number of Residues5
Detailscatalytic and substrate binding site
ChainResidue
AGLU168
AGLU211
ALYS345
AHIS373
ALYS396

site_idMEI
Number of Residues3
Detailsmetal ion binding site
ChainResidue
AASP246
AGLU295
AASP320

site_idPHO
Number of Residues1
Detailsphosphate binding site
ChainResidue
AARG374

Functional Information from PROSITE/UniProt
site_idPS00164
Number of Residues14
DetailsENOLASE Enolase signature. LLLKvNQIGTLSES
ChainResidueDetails
ALEU342-SER355

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"12846578","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"12846578","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8634301","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8605183","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9376357","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8605183","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12054465","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8605183","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9376357","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P00925","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P00925","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P00925","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
Detailsa catalytic site defined by CSA, PubMed 8634301, 9217018
ChainResidueDetails
ALYS345
AGLU211
AHIS373
AGLU168

site_idMCSA1
Number of Residues10
DetailsM-CSA 311
ChainResidueDetails
ASER39metal ligand
ALYS396electrostatic stabiliser, hydrogen bond donor, proton shuttle (general acid/base)
AHIS159electrostatic stabiliser, proton shuttle (general acid/base)
AGLU168activator, electrostatic stabiliser, hydrogen bond acceptor, increase acidity, repulsive charge-charge interaction
AGLU211electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton donor
AASP246metal ligand
AGLU295metal ligand
AASP320metal ligand
ALYS345electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor
AHIS373electrostatic stabiliser, hydrogen bond donor

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PDB entries from 2025-07-30

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