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5EMZ

Crystal structure of K48-linked diubiquitin with F45W mutation in the proximal unit

Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue SO4 B 101
ChainResidue
AARG42
AGLN49
AARG72
BARG42
BGLN49
BARG72
BHOH246

site_idAC2
Number of Residues6
Detailsbinding site for residue SO4 D 101
ChainResidue
CARG72
DARG42
DGLN49
DARG72
CARG42
CGLN49

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 E 101
ChainResidue
EARG42
EGLN49
EHOH205
FARG42
FGLN49

site_idAC4
Number of Residues2
Detailsbinding site for residue SO4 E 102
ChainResidue
EHOH208
EHOH209

site_idAC5
Number of Residues21
Detailsbinding site for Di-peptide LYS D 48 and GLY C 76
ChainResidue
CILE44
CPHE45
CALA46
CGLY47
CGLN49
CLEU50
CLEU71
CLEU71
CLEU73
CARG74
CGLY75
DILE44
DTRP45
DALA46
DALA46
DGLY47
DGLN49
DLEU50
DLEU71
DHOH212
DHOH226

site_idAC6
Number of Residues24
Detailsbinding site for Di-peptide LYS F 48 and GLY E 76
ChainResidue
ALEU71
BALA46
EILE44
EPHE45
EALA46
EGLY47
EGLN49
ELEU50
ELEU71
ELEU73
EARG74
EGLY75
EHOH203
EHOH207
EHOH212
EHOH227
FILE44
FTRP45
FALA46
FGLY47
FGLN49
FLEU50
FLEU71
FLEU73

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGrqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues225
DetailsDomain: {"description":"Ubiquitin-like 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00214","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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