5ED4

Structure of a PhoP-DNA complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000156	molecular_function	phosphorelay response regulator activity
A	0000160	biological_process	phosphorelay signal transduction system
A	0000976	molecular_function	transcription cis-regulatory region binding
A	0003677	molecular_function	DNA binding
A	0005515	molecular_function	protein binding
A	0005829	cellular_component	cytosol
A	0005886	cellular_component	plasma membrane
A	0006355	biological_process	regulation of DNA-templated transcription
A	0006979	biological_process	response to oxidative stress
A	0009247	biological_process	glycolipid biosynthetic process
A	0010628	biological_process	positive regulation of gene expression
A	0032993	cellular_component	protein-DNA complex
A	0044315	biological_process	protein secretion by the type VII secretion system
A	0045892	biological_process	negative regulation of DNA-templated transcription
A	0045893	biological_process	positive regulation of DNA-templated transcription
A	0046872	molecular_function	metal ion binding
A	0046889	biological_process	positive regulation of lipid biosynthetic process
B	0000156	molecular_function	phosphorelay response regulator activity
B	0000160	biological_process	phosphorelay signal transduction system
B	0000976	molecular_function	transcription cis-regulatory region binding
B	0003677	molecular_function	DNA binding
B	0005515	molecular_function	protein binding
B	0005829	cellular_component	cytosol
B	0005886	cellular_component	plasma membrane
B	0006355	biological_process	regulation of DNA-templated transcription
B	0006979	biological_process	response to oxidative stress
B	0009247	biological_process	glycolipid biosynthetic process
B	0010628	biological_process	positive regulation of gene expression
B	0032993	cellular_component	protein-DNA complex
B	0044315	biological_process	protein secretion by the type VII secretion system
B	0045892	biological_process	negative regulation of DNA-templated transcription
B	0045893	biological_process	positive regulation of DNA-templated transcription
B	0046872	molecular_function	metal ion binding
B	0046889	biological_process	positive regulation of lipid biosynthetic process
E	0000156	molecular_function	phosphorelay response regulator activity
E	0000160	biological_process	phosphorelay signal transduction system
E	0000976	molecular_function	transcription cis-regulatory region binding
E	0003677	molecular_function	DNA binding
E	0005515	molecular_function	protein binding
E	0005829	cellular_component	cytosol
E	0005886	cellular_component	plasma membrane
E	0006355	biological_process	regulation of DNA-templated transcription
E	0006979	biological_process	response to oxidative stress
E	0009247	biological_process	glycolipid biosynthetic process
E	0010628	biological_process	positive regulation of gene expression
E	0032993	cellular_component	protein-DNA complex
E	0044315	biological_process	protein secretion by the type VII secretion system
E	0045892	biological_process	negative regulation of DNA-templated transcription
E	0045893	biological_process	positive regulation of DNA-templated transcription
E	0046872	molecular_function	metal ion binding
E	0046889	biological_process	positive regulation of lipid biosynthetic process
F	0000156	molecular_function	phosphorelay response regulator activity
F	0000160	biological_process	phosphorelay signal transduction system
F	0000976	molecular_function	transcription cis-regulatory region binding
F	0003677	molecular_function	DNA binding
F	0005515	molecular_function	protein binding
F	0005829	cellular_component	cytosol
F	0005886	cellular_component	plasma membrane
F	0006355	biological_process	regulation of DNA-templated transcription
F	0006979	biological_process	response to oxidative stress
F	0009247	biological_process	glycolipid biosynthetic process
F	0010628	biological_process	positive regulation of gene expression
F	0032993	cellular_component	protein-DNA complex
F	0044315	biological_process	protein secretion by the type VII secretion system
F	0045892	biological_process	negative regulation of DNA-templated transcription
F	0045893	biological_process	positive regulation of DNA-templated transcription
F	0046872	molecular_function	metal ion binding
F	0046889	biological_process	positive regulation of lipid biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	binding site for residue CA A 301

Chain	Residue
A	ASP28
A	ASP71
A	MET73
A	HOH422
A	HOH438
A	HOH447

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site_id	AC2
Number of Residues	5
Details	binding site for residue EDO A 302

Chain	Residue
A	ARG204
A	TYR205
A	LEU199
A	ASP200
A	TRP203

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site_id	AC3
Number of Residues	5
Details	binding site for residue EDO A 303

Chain	Residue
A	ASN52
A	GLY53
A	PRO75
A	MET77
E	ARG247

---

site_id	AC4
Number of Residues	5
Details	binding site for residue CA B 301

Chain	Residue
B	ASP28
B	ASP71
B	MET73
B	HOH406
B	HOH424

---

site_id	AC5
Number of Residues	6
Details	binding site for residue CA B 302

Chain	Residue
B	ASP200
B	HOH416
B	HOH419
E	GLY76
E	HOH441
E	HOH457

---

site_id	AC6
Number of Residues	4
Details	binding site for residue EDO B 303

Chain	Residue
B	LYS195
B	VAL239
B	GLY240
D	DG7

---

site_id	AC7
Number of Residues	6
Details	binding site for residue CA E 301

Chain	Residue
E	ASP28
E	ASP71
E	MET73
E	HOH402
E	HOH410
E	HOH462

---

site_id	AC8
Number of Residues	5
Details	binding site for residue EDO E 302

Chain	Residue
E	GLU164
E	VAL165
E	PRO171
E	VAL172
E	HOH430

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site_id	AC9
Number of Residues	4
Details	binding site for residue CAC E 303

Chain	Residue
E	GLU62
E	ARG150
E	GLU157
E	TRP166

---

site_id	AD1
Number of Residues	4
Details	binding site for residue CA F 301

Chain	Residue
A	HOH404
A	HOH413
C	DT3
F	GLU62

---

site_id	AD2
Number of Residues	6
Details	binding site for residue CA F 302

Chain	Residue
F	ASP28
F	ASP71
F	MET73
F	HOH403
F	HOH419
F	HOH424

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Functional Information from PROSITE/UniProt

site_id	PS00217
Number of Residues	26
Details	SUGAR_TRANSPORT_2 Sugar transport proteins signature 2. IaGLTlGGddyvtkpFslEevvarlR

Chain	Residue	Details
A	ILE108-ARG133

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