5E1D
NTMT1 in complex with YPKRIA peptide
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006338 | biological_process | chromatin remodeling |
A | 0006480 | biological_process | N-terminal protein amino acid methylation |
A | 0007051 | biological_process | spindle organization |
A | 0007059 | biological_process | chromosome segregation |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0008276 | molecular_function | protein methyltransferase activity |
A | 0016740 | molecular_function | transferase activity |
A | 0018013 | biological_process | N-terminal peptidyl-glycine methylation |
A | 0018016 | biological_process | N-terminal peptidyl-proline dimethylation |
A | 0032259 | biological_process | methylation |
A | 0035572 | biological_process | N-terminal peptidyl-serine dimethylation |
A | 0035573 | biological_process | N-terminal peptidyl-serine trimethylation |
A | 0042054 | molecular_function | histone methyltransferase activity |
A | 0071885 | molecular_function | N-terminal protein N-methyltransferase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005634 | cellular_component | nucleus |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006338 | biological_process | chromatin remodeling |
B | 0006480 | biological_process | N-terminal protein amino acid methylation |
B | 0007051 | biological_process | spindle organization |
B | 0007059 | biological_process | chromosome segregation |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0008276 | molecular_function | protein methyltransferase activity |
B | 0016740 | molecular_function | transferase activity |
B | 0018013 | biological_process | N-terminal peptidyl-glycine methylation |
B | 0018016 | biological_process | N-terminal peptidyl-proline dimethylation |
B | 0032259 | biological_process | methylation |
B | 0035572 | biological_process | N-terminal peptidyl-serine dimethylation |
B | 0035573 | biological_process | N-terminal peptidyl-serine trimethylation |
B | 0042054 | molecular_function | histone methyltransferase activity |
B | 0071885 | molecular_function | N-terminal protein N-methyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 20 |
Details | binding site for residue SAH A 301 |
Chain | Residue |
A | TRP20 |
A | PHE96 |
A | GLY118 |
A | LEU119 |
A | GLN120 |
A | GLN135 |
A | TRP136 |
A | VAL137 |
A | HIS140 |
A | HOH423 |
A | HOH493 |
A | MET30 |
A | HOH523 |
A | GLY69 |
A | GLY71 |
A | ARG74 |
A | ILE75 |
A | ASP91 |
A | ILE92 |
A | THR93 |
site_id | AC2 |
Number of Residues | 10 |
Details | binding site for residue GOL A 302 |
Chain | Residue |
A | TRP136 |
A | VAL137 |
A | ILE138 |
A | GLY139 |
A | ASP167 |
A | ASN168 |
A | SER182 |
A | HOH435 |
D | TYR1 |
D | LYS3 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue GOL A 303 |
Chain | Residue |
A | HIS36 |
A | HOH408 |
A | HOH414 |
B | TYR19 |
B | GLY32 |
E | TYR1 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue GOL A 304 |
Chain | Residue |
A | GLU86 |
A | ARG112 |
A | HOH412 |
A | HOH446 |
A | HOH447 |
B | ARG46 |
site_id | AC5 |
Number of Residues | 21 |
Details | binding site for residue SAH B 301 |
Chain | Residue |
B | TRP20 |
B | MET30 |
B | GLY69 |
B | GLY71 |
B | ARG74 |
B | ILE75 |
B | ASP91 |
B | ILE92 |
B | THR93 |
B | PHE96 |
B | CYS117 |
B | GLY118 |
B | LEU119 |
B | GLN120 |
B | GLN135 |
B | TRP136 |
B | VAL137 |
B | HIS140 |
B | HOH432 |
B | HOH475 |
B | HOH493 |
site_id | AC6 |
Number of Residues | 10 |
Details | binding site for residue GOL B 302 |
Chain | Residue |
B | TRP136 |
B | VAL137 |
B | ILE138 |
B | GLY139 |
B | ASP167 |
B | ASN168 |
B | SER182 |
B | HOH408 |
E | TYR1 |
E | LYS3 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 10 |
Details | BINDING: BINDING => ECO:0000269|PubMed:26543159, ECO:0000269|PubMed:26543161, ECO:0007744|PDB:2EX4, ECO:0007744|PDB:5CVD, ECO:0007744|PDB:5CVE, ECO:0007744|PDB:5E1D, ECO:0007744|PDB:5E1M, ECO:0007744|PDB:5E1O, ECO:0007744|PDB:5E2A, ECO:0007744|PDB:5E2B |
Chain | Residue | Details |
A | GLY69 | |
B | GLN135 | |
A | ARG74 | |
A | ASP91 | |
A | LEU119 | |
A | GLN135 | |
B | GLY69 | |
B | ARG74 | |
B | ASP91 | |
B | LEU119 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | MOD_RES: N-acetylthreonine; in N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed => ECO:0000269|Ref.5, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895 |
Chain | Residue | Details |
A | THR2 | |
B | THR2 |