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5DX5

Crystal structure of methionine gamma-lyase from Clostridium sporogenes

Functional Information from GO Data
ChainGOidnamespacecontents
A0018826molecular_functionmethionine gamma-lyase activity
A0019346biological_processtranssulfuration
A0030170molecular_functionpyridoxal phosphate binding
B0018826molecular_functionmethionine gamma-lyase activity
B0019346biological_processtranssulfuration
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue PLP A 501
ChainResidue
ASER87
AALA222
ACL502
BTYR58
BARG60
AGLY88
AMET89
ATYR113
AASP187
APHE190
ASER209
ATHR211
ALYS212

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 502
ChainResidue
ATYR113
APLP501
AHOH679
AHOH683

site_idAC3
Number of Residues4
Detailsbinding site for residue CL B 502
ChainResidue
BSER341
BLEU342
BPLP501
BHOH685

site_idAC4
Number of Residues7
Detailsbinding site for residue NA B 503
ChainResidue
BGLY216
BHIS217
BGLY218
BASP344
BSER345
BGLU346
BHOH676

site_idAC5
Number of Residues20
Detailsbinding site for Di-peptide PLP B 501 and LYS B 212
ChainResidue
ATYR58
AARG60
BSER87
BGLY88
BMET89
BTYR113
BASN160
BASP187
BTHR189
BSER209
BALA210
BTHR211
BTYR213
BLEU214
BGLY216
BSER341
BLEU342
BGLY343
BCL502
BHOH613

Functional Information from PROSITE/UniProt
site_idPS00868
Number of Residues15
DetailsCYS_MET_METAB_PP Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. DVvvhSATKYLnGHG
ChainResidueDetails
AASP204-GLY218

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PDB entries from 2024-07-24

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