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5DPT

Crystal structure of PLEKHM1 LIR-fused human GABARAPL1_2-117

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000421cellular_componentautophagosome membrane
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005776cellular_componentautophagosome
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008429molecular_functionphosphatidylethanolamine binding
A0016020cellular_componentmembrane
A0030659cellular_componentcytoplasmic vesicle membrane
A0030957molecular_functionTat protein binding
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0048487molecular_functionbeta-tubulin binding
A0050811molecular_functionGABA receptor binding
A0061723biological_processglycophagy
A0097352biological_processautophagosome maturation
B0000045biological_processautophagosome assembly
B0000421cellular_componentautophagosome membrane
B0005515molecular_functionprotein binding
B0005543molecular_functionphospholipid binding
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005776cellular_componentautophagosome
B0005783cellular_componentendoplasmic reticulum
B0005794cellular_componentGolgi apparatus
B0005829cellular_componentcytosol
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0006914biological_processautophagy
B0006995biological_processcellular response to nitrogen starvation
B0008429molecular_functionphosphatidylethanolamine binding
B0016020cellular_componentmembrane
B0030659cellular_componentcytoplasmic vesicle membrane
B0030957molecular_functionTat protein binding
B0031410cellular_componentcytoplasmic vesicle
B0031625molecular_functionubiquitin protein ligase binding
B0048487molecular_functionbeta-tubulin binding
B0050811molecular_functionGABA receptor binding
B0061723biological_processglycophagy
B0097352biological_processautophagosome maturation
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MPD A 201
ChainResidue
APHE69
APRO79
BTYR68
BPHE85
BILE91
BTHR94

site_idAC2
Number of Residues6
Detailsbinding site for residue MPD B 201
ChainResidue
AILE91
APRO92
BPRO79
ATYR68
APHE84
APHE85

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: (Microbial infection) Cleavage; by RavZ => ECO:0000269|PubMed:23112293
ChainResidueDetails
ATYR122
BTYR122

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Cleavage; by ATG4B => ECO:0000269|PubMed:20404487
ChainResidueDetails
AGLY123
BGLY123

site_idSWS_FT_FI3
Number of Residues2
DetailsLIPID: Phosphatidylserine amidated glycine; alternate => ECO:0000269|PubMed:33909989
ChainResidueDetails
AGLY123
BGLY123

219869

PDB entries from 2024-05-15

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