5DPT
Crystal structure of PLEKHM1 LIR-fused human GABARAPL1_2-117
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 84.791, 84.791, 105.440 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.826 - 2.900 |
R-factor | 0.2162 |
Rwork | 0.214 |
R-free | 0.25950 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.778 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.826 | 3.030 |
High resolution limit [Å] | 2.900 | 2.900 |
Number of reflections | 10119 | |
<I/σ(I)> | 10.6 | |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 10.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.2 | 278 | 20% w/v Polyethylene glycol 3,350, 0.2 M NaCl, 8% MPD pH 7.2 |