5DFA
3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus
Replaces: 4OJYFunctional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004565 | molecular_function | beta-galactosidase activity |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006012 | biological_process | galactose metabolic process |
A | 0009341 | cellular_component | beta-galactosidase complex |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0046872 | molecular_function | metal ion binding |
B | 0004565 | molecular_function | beta-galactosidase activity |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006012 | biological_process | galactose metabolic process |
B | 0009341 | cellular_component | beta-galactosidase complex |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0046872 | molecular_function | metal ion binding |
C | 0004565 | molecular_function | beta-galactosidase activity |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0006012 | biological_process | galactose metabolic process |
C | 0009341 | cellular_component | beta-galactosidase complex |
C | 0016787 | molecular_function | hydrolase activity |
C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 701 |
Chain | Residue |
A | CYS124 |
A | CYS164 |
A | CYS166 |
A | CYS169 |
site_id | AC2 |
Number of Residues | 8 |
Details | binding site for residue GOL A 702 |
Chain | Residue |
A | HIS625 |
A | HOH1019 |
A | HOH1059 |
A | GLU452 |
A | ARG453 |
A | PHE622 |
A | VAL623 |
A | LYS624 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue GOL A 703 |
Chain | Residue |
A | ARG120 |
A | GLU159 |
A | ASP285 |
A | TYR287 |
A | PHE361 |
A | GLU371 |
A | HOH829 |
C | HOH883 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue GOL A 704 |
Chain | Residue |
A | ASN330 |
A | HIS332 |
A | LYS333 |
A | ASN335 |
C | ALA429 |
C | GLN430 |
C | GLY431 |
C | ALA434 |
C | LYS437 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue ZN B 701 |
Chain | Residue |
B | CYS124 |
B | CYS164 |
B | CYS166 |
B | CYS169 |
site_id | AC6 |
Number of Residues | 7 |
Details | binding site for residue GOL B 702 |
Chain | Residue |
B | GLU452 |
B | ARG453 |
B | PHE622 |
B | VAL623 |
B | LYS624 |
B | HIS625 |
B | HOH820 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue GOL B 703 |
Chain | Residue |
B | ARG120 |
B | GLU159 |
B | ASP285 |
B | TYR287 |
B | PHE361 |
B | GLU371 |
B | HOH963 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue GOL B 704 |
Chain | Residue |
B | ARG438 |
B | THR442 |
B | ARG598 |
B | HOH924 |
B | HOH925 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue ZN C 701 |
Chain | Residue |
C | CYS124 |
C | CYS164 |
C | CYS166 |
C | CYS169 |
site_id | AD1 |
Number of Residues | 6 |
Details | binding site for residue GOL C 702 |
Chain | Residue |
C | GLU452 |
C | ARG453 |
C | VAL623 |
C | LYS624 |
C | HIS625 |
C | HOH809 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue GOL C 703 |
Chain | Residue |
C | ARG438 |
C | THR442 |
C | GLN445 |
C | ARG598 |
site_id | AD3 |
Number of Residues | 8 |
Details | binding site for residue GOL C 704 |
Chain | Residue |
B | HOH862 |
C | ARG120 |
C | GLU159 |
C | ASP285 |
C | TYR287 |
C | PHE361 |
C | GLU371 |
C | HOH815 |
Functional Information from PROSITE/UniProt
site_id | PS00018 |
Number of Residues | 13 |
Details | EF_HAND_1 EF-hand calcium-binding domain. DYNPDQWLDrpDI |
Chain | Residue | Details |
A | ASP21-ILE33 |