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5DFA

3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus

Replaces:  4OJY
Functional Information from GO Data
ChainGOidnamespacecontents
A0004565molecular_functionbeta-galactosidase activity
A0005975biological_processcarbohydrate metabolic process
A0006012biological_processgalactose metabolic process
A0009341cellular_componentbeta-galactosidase complex
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0046872molecular_functionmetal ion binding
B0004565molecular_functionbeta-galactosidase activity
B0005975biological_processcarbohydrate metabolic process
B0006012biological_processgalactose metabolic process
B0009341cellular_componentbeta-galactosidase complex
B0016787molecular_functionhydrolase activity
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0046872molecular_functionmetal ion binding
C0004565molecular_functionbeta-galactosidase activity
C0005975biological_processcarbohydrate metabolic process
C0006012biological_processgalactose metabolic process
C0009341cellular_componentbeta-galactosidase complex
C0016787molecular_functionhydrolase activity
C0016798molecular_functionhydrolase activity, acting on glycosyl bonds
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 701
ChainResidue
ACYS124
ACYS164
ACYS166
ACYS169

site_idAC2
Number of Residues8
Detailsbinding site for residue GOL A 702
ChainResidue
AHIS625
AHOH1019
AHOH1059
AGLU452
AARG453
APHE622
AVAL623
ALYS624

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 703
ChainResidue
AARG120
AGLU159
AASP285
ATYR287
APHE361
AGLU371
AHOH829
CHOH883

site_idAC4
Number of Residues9
Detailsbinding site for residue GOL A 704
ChainResidue
AASN330
AHIS332
ALYS333
AASN335
CALA429
CGLN430
CGLY431
CALA434
CLYS437

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 701
ChainResidue
BCYS124
BCYS164
BCYS166
BCYS169

site_idAC6
Number of Residues7
Detailsbinding site for residue GOL B 702
ChainResidue
BGLU452
BARG453
BPHE622
BVAL623
BLYS624
BHIS625
BHOH820

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL B 703
ChainResidue
BARG120
BGLU159
BASP285
BTYR287
BPHE361
BGLU371
BHOH963

site_idAC8
Number of Residues5
Detailsbinding site for residue GOL B 704
ChainResidue
BARG438
BTHR442
BARG598
BHOH924
BHOH925

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN C 701
ChainResidue
CCYS124
CCYS164
CCYS166
CCYS169

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL C 702
ChainResidue
CGLU452
CARG453
CVAL623
CLYS624
CHIS625
CHOH809

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL C 703
ChainResidue
CARG438
CTHR442
CGLN445
CARG598

site_idAD3
Number of Residues8
Detailsbinding site for residue GOL C 704
ChainResidue
BHOH862
CARG120
CGLU159
CASP285
CTYR287
CPHE361
CGLU371
CHOH815

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DYNPDQWLDrpDI
ChainResidueDetails
AASP21-ILE33

238268

PDB entries from 2025-07-02

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