Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006211 | biological_process | 5-methylcytosine catabolic process |
A | 0070579 | molecular_function | 5-methylcytosine dioxygenase activity |
A | 0141166 | biological_process | chromosomal 5-methylcytosine DNA demethylation pathway |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | binding site for residue OGA A 2001 |
Chain | Residue |
A | ARG1261 |
A | FE2003 |
A | HOH2113 |
B | 5HC6 |
A | CYS1374 |
A | HIS1382 |
A | ASP1384 |
A | HIS1416 |
A | HIS1881 |
A | THR1883 |
A | ARG1896 |
A | SER1898 |
site_id | AC2 |
Number of Residues | 8 |
Details | binding site for residue MES A 2002 |
Chain | Residue |
A | GLU1186 |
A | ALA1381 |
A | HIS1382 |
A | ARG1383 |
A | LEU1385 |
A | LEU1880 |
A | HOH2111 |
C | DG11 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue FE A 2003 |
Chain | Residue |
A | HIS1382 |
A | ASP1384 |
A | HIS1881 |
A | OGA2001 |
A | HOH2113 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2004 |
Chain | Residue |
A | CYS1133 |
A | CYS1135 |
A | HIS1219 |
A | CYS1221 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2005 |
Chain | Residue |
A | CYS1193 |
A | CYS1271 |
A | CYS1273 |
A | HIS1380 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2006 |
Chain | Residue |
A | CYS1289 |
A | CYS1298 |
A | CYS1358 |
A | HIS1912 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue CL A 2007 |
Chain | Residue |
A | ASN1387 |
A | SER1392 |
A | THR1393 |
A | ALA1876 |
A | LYS1877 |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | CYS1133 | |
A | CYS1298 | |
A | CYS1358 | |
A | CYS1374 | |
A | HIS1380 | |
A | HIS1382 | |
A | ASP1384 | |
A | ASN1387 | |
A | HIS1416 | |
A | HIS1881 | |
A | ARG1896 | |
A | CYS1135 | |
A | TYR1902 | |
A | HIS1912 | |
A | CYS1193 | |
A | HIS1219 | |
A | CYS1221 | |
A | ARG1261 | |
A | CYS1271 | |
A | CYS1273 | |
A | CYS1289 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25557551 |
Chain | Residue | Details |
A | LYS1299 | |