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5DDR

L-glutamine riboswitch bound with L-glutamine soaked with Cs+

Functional Information from GO Data
ChainGOidnamespacecontents
C0003676molecular_functionnucleic acid binding
C0003723molecular_functionRNA binding
D0003676molecular_functionnucleic acid binding
D0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue GLN A 101
ChainResidue
AC1
AHOH254
AG22
AG23
AG54
AC58
AG59
AC60
AMG107
AHOH201

site_idAC2
Number of Residues3
Detailsbinding site for residue K A 102
ChainResidue
AMG109
AHOH208
AHOH282

site_idAC3
Number of Residues4
Detailsbinding site for residue K A 103
ChainResidue
ACS113
AHOH206
AHOH208
AHOH282

site_idAC4
Number of Residues3
Detailsbinding site for residue K A 104
ChainResidue
BHOH206
BHOH286
BHOH290

site_idAC5
Number of Residues7
Detailsbinding site for residue K A 105
ChainResidue
AG30
AG31
AU32
AHOH240
AHOH249
AHOH259
AHOH293

site_idAC6
Number of Residues6
Detailsbinding site for residue MG A 106
ChainResidue
AHOH217
AHOH219
AHOH264
AHOH265
AHOH305
AHOH310

site_idAC7
Number of Residues7
Detailsbinding site for residue MG A 107
ChainResidue
AG54
AGLN101
AHOH201
AHOH210
AHOH225
AHOH245
AHOH254

site_idAC8
Number of Residues5
Detailsbinding site for residue MG A 108
ChainResidue
AHOH247
AHOH258
AHOH276
AHOH289
AHOH307

site_idAC9
Number of Residues8
Detailsbinding site for residue MG A 109
ChainResidue
AK102
AHOH246
AHOH248
AHOH251
AHOH277
AHOH282
AHOH297
AHOH304

site_idAD1
Number of Residues6
Detailsbinding site for residue MG A 110
ChainResidue
AA29
AHOH218
AHOH242
AHOH253
AHOH286
AHOH309

site_idAD2
Number of Residues5
Detailsbinding site for residue MG A 111
ChainResidue
AHOH243
AHOH288
AHOH295
AHOH302
AHOH303

site_idAD3
Number of Residues7
Detailsbinding site for residue CS A 112
ChainResidue
AG11
AG12
AHOH213
AHOH238
AHOH268
AHOH276
AHOH298

site_idAD4
Number of Residues6
Detailsbinding site for residue CS A 113
ChainResidue
AG20
AC21
AK103
AHOH206
AHOH223
AHOH272

site_idAD5
Number of Residues4
Detailsbinding site for residue CS A 114
ChainResidue
AG46
AHOH255
AHOH259
AHOH284

site_idAD6
Number of Residues12
Detailsbinding site for residue GLN B 101
ChainResidue
BC1
BG22
BG23
BG54
BC58
BG59
BC60
BMG106
BHOH205
BHOH212
BHOH223
BHOH238

site_idAD7
Number of Residues3
Detailsbinding site for residue K B 102
ChainResidue
AA13
AHOH202
BC33

site_idAD8
Number of Residues7
Detailsbinding site for residue K B 103
ChainResidue
BHOH257
BHOH279
BHOH303
BHOH310
BU32
BG46
BK104

site_idAD9
Number of Residues6
Detailsbinding site for residue K B 104
ChainResidue
BG30
BG31
BU32
BK103
BHOH285
BHOH303

site_idAE1
Number of Residues3
Detailsbinding site for residue MG B 105
ChainResidue
BC16
BHOH292
BHOH293

site_idAE2
Number of Residues7
Detailsbinding site for residue MG B 106
ChainResidue
BG54
BGLN101
BHOH205
BHOH212
BHOH221
BHOH223
BHOH231

site_idAE3
Number of Residues6
Detailsbinding site for residue MG B 107
ChainResidue
BG12
BA14
BHOH228
BHOH249
BHOH254
BHOH309

site_idAE4
Number of Residues6
Detailsbinding site for residue MG B 108
ChainResidue
BG18
BHOH202
BHOH269
BHOH283
BHOH288
BHOH311

site_idAE5
Number of Residues3
Detailsbinding site for residue NA B 109
ChainResidue
BG51
BHOH284
BHOH298

site_idAE6
Number of Residues5
Detailsbinding site for residue NA B 110
ChainResidue
BA25
BG26
BHOH235
BHOH273
BHOH282

site_idAE7
Number of Residues5
Detailsbinding site for residue NA B 111
ChainResidue
BA25
BG26
BHOH235
BHOH270
BHOH282

site_idAE8
Number of Residues3
Detailsbinding site for residue NA B 112
ChainResidue
BG26
BG51
BHOH284

site_idAE9
Number of Residues2
Detailsbinding site for residue CS B 113
ChainResidue
BHOH209
BHOH250

site_idAF1
Number of Residues2
Detailsbinding site for residue CS B 114
ChainResidue
BHOH232
BHOH266

site_idAF2
Number of Residues1
Detailsbinding site for residue CS B 115
ChainResidue
BG11

site_idAF3
Number of Residues1
Detailsbinding site for residue CS B 116
ChainResidue
BG12

site_idAF4
Number of Residues3
Detailsbinding site for residue MG C 101
ChainResidue
CLYS19
CLYS79
CHOH214

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N-acetylalanine => ECO:0000269|Ref.4, ECO:0007744|PubMed:19413330
ChainResidueDetails
CALA1
DALA1

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS59
DLYS59

237423

PDB entries from 2025-06-11

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