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5D9Y

Crystal structure of TET2-5fC complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0016706molecular_function2-oxoglutarate-dependent dioxygenase activity
A0040029biological_processepigenetic regulation of gene expression
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue OGA A 2001
ChainResidue
AARG1261
AFE2002
AHOH2136
AHOH2255
B5FC6
ACYS1374
AHIS1382
AASP1384
AHIS1416
AHIS1881
ATHR1883
AARG1896
ASER1898

site_idAC2
Number of Residues5
Detailsbinding site for residue FE A 2002
ChainResidue
AHIS1382
AASP1384
AHIS1881
AOGA2001
AHOH2136

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 2003
ChainResidue
ACYS1133
ACYS1135
AHIS1219
ACYS1221

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 2004
ChainResidue
ACYS1193
ACYS1271
ACYS1273
AHIS1380

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 2005
ChainResidue
ACYS1289
ACYS1298
ACYS1358
AHIS1912

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues13
DetailsRegion: {"description":"Interaction with DNA"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues23
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24315485","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"25557551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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