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5D6W

Crystal structure of double tudor domain of human lysine demethylase KDM4A

Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue SRT A 1101
ChainResidue
ALYS910
AGLY993
ASER994
AGLN995
AHOH1202
AHOH1241
AHOH1246

site_idAC2
Number of Residues7
Detailsbinding site for residue SRT B 1101
ChainResidue
BSER994
BGLN995
BHOH1201
BHOH1226
BHOH1267
BLYS910
BGLY993

site_idAC3
Number of Residues7
Detailsbinding site for residue SRT C 1101
ChainResidue
CLYS910
CASP992
CGLY993
CSER994
CGLN995
CHOH1210
CHOH1239

site_idAC4
Number of Residues7
Detailsbinding site for residue SRT D 1101
ChainResidue
DLYS910
DGLY993
DSER994
DGLN995
DHOH1201
DHOH1223
DHOH1265

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues228
DetailsDomain: {"description":"Tudor 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues224
DetailsDomain: {"description":"Tudor 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsSite: {"description":"Histone H3K4me3 binding"}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 370
ChainResidueDetails

site_idMCSA2
Number of Residues
DetailsM-CSA 370
ChainResidueDetails

site_idMCSA3
Number of Residues
DetailsM-CSA 370
ChainResidueDetails

site_idMCSA4
Number of Residues
DetailsM-CSA 370
ChainResidueDetails

246031

PDB entries from 2025-12-10

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