Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006281 | biological_process | DNA repair |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0034061 | molecular_function | DNA polymerase activity |
B | 0003677 | molecular_function | DNA binding |
B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
B | 0006281 | biological_process | DNA repair |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0034061 | molecular_function | DNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue MG A 601 |
Chain | Residue |
A | ASP343 |
A | ASP345 |
C | DC6 |
C | SO4401 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue NA A 602 |
Chain | Residue |
A | THR253 |
A | VAL255 |
A | VAL258 |
C | DA4 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue SO4 A 603 |
Chain | Residue |
A | MET339 |
A | THR340 |
A | LYS338 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 604 |
Chain | Residue |
A | LYS469 |
A | ARG480 |
B | SER207 |
B | LYS209 |
B | GLU467 |
B | ARG468 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue MG B 601 |
Chain | Residue |
B | ASP343 |
B | ASP345 |
B | SO4603 |
B | HOH702 |
D | DC6 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue NA B 602 |
Chain | Residue |
B | THR253 |
B | VAL255 |
B | VAL258 |
D | DA4 |
site_id | AC7 |
Number of Residues | 8 |
Details | binding site for residue SO4 B 603 |
Chain | Residue |
B | GLY332 |
B | GLY333 |
B | ARG336 |
B | ASP345 |
B | MG601 |
B | HOH702 |
B | HOH707 |
D | DC6 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue SO4 B 604 |
Chain | Residue |
B | LYS338 |
B | MET339 |
B | THR340 |
site_id | AC9 |
Number of Residues | 2 |
Details | binding site for residue SO4 B 605 |
Chain | Residue |
A | LYS426 |
B | LYS426 |
site_id | AD1 |
Number of Residues | 5 |
Details | binding site for residue SO4 B 606 |
Chain | Residue |
B | ASN184 |
B | GLU185 |
B | GLY186 |
B | SER187 |
E | DA1 |
site_id | AD2 |
Number of Residues | 8 |
Details | binding site for residue SO4 C 401 |
Chain | Residue |
A | GLY332 |
A | GLY333 |
A | ARG336 |
A | LYS338 |
A | ASP345 |
A | MG601 |
C | DC6 |
C | HOH503 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue SO4 C 402 |
Chain | Residue |
C | DA5 |
C | DC6 |
C | HOH501 |
C | HOH502 |
Functional Information from PROSITE/UniProt
site_id | PS00522 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGkmtGhDVDFLItsP |
Chain | Residue | Details |
A | GLY332-PRO351 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | GLY333 | |
A | HIS342 | |
A | GLY449 | |
B | GLY333 | |
B | HIS342 | |
B | GLY449 | |
Chain | Residue | Details |
A | ASP343 | |
A | ASP345 | |
A | ASP434 | |
B | ASP343 | |
B | ASP345 | |
B | ASP434 | |
Chain | Residue | Details |
A | SER134 | |
B | SER134 | |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 3 |
Details | M-CSA 632 |
Chain | Residue | Details |
A | ASP343 | metal ligand |
A | ASP345 | metal ligand |
A | ASP434 | metal ligand, proton acceptor, proton donor |
site_id | MCSA2 |
Number of Residues | 3 |
Details | M-CSA 632 |
Chain | Residue | Details |
B | ASP343 | metal ligand |
B | ASP345 | metal ligand |
B | ASP434 | metal ligand, proton acceptor, proton donor |